KEGG   Spinacia oleracea (spinach): 110806136
Entry
110806136         CDS       T05137                                 
Name
(RefSeq) sm-like protein LSM5
  KO
K12624  U6 snRNA-associated Sm-like protein LSm5
Organism
soe  Spinacia oleracea (spinach)
Pathway
soe03018  RNA degradation
soe03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:soe00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    110806136
  09123 Folding, sorting and degradation
   03018 RNA degradation
    110806136
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:soe03019]
    110806136
   03041 Spliceosome [BR:soe03041]
    110806136
Messenger RNA biogenesis [BR:soe03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     110806136
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     110806136
Spliceosome [BR:soe03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    110806136
SSDB
Motif
Pfam: LSM DUF7452 Ntox4
Other DBs
NCBI-GeneID: 110806136
NCBI-ProteinID: XP_021867463
UniProt: A0A9R0JG55
LinkDB
Position
4:38326366..38334703
AA seq 88 aa
MSSNNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEG
RRITKLDQILLNGNNIAILVPGGSPDAE
NT seq 267 nt   +upstreamnt  +downstreamnt
atgtcgtcaaacaatccatcccagctcctcccctcagagttgatagacagatgcataggc
tctaagatttgggtgattatgaagggtgataaggagcttgttggtactcttcgaggtttc
gatgtctatgttaacatggtgcttgaagatgttactgaatatgaaataactgctgaagga
cgaagaatcacaaaacttgatcagattctgctaaatggaaacaacattgccattttggtt
cctggtggttcgcctgatgcagaatga

DBGET integrated database retrieval system