Spinacia oleracea (spinach): 130462573
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Entry
130462573 CDS
T05137
Name
(RefSeq) protein SEH1
KO
K14299
nucleoporin SEH1
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
130462573
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
soe03019
]
130462573
04131 Membrane trafficking [BR:
soe04131
]
130462573
Messenger RNA biogenesis [BR:
soe03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
130462573
Membrane trafficking [BR:
soe04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
130462573
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
WD40
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40_WDHD1_1st
WD40_Prp19
ANAPC4_WD40
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_EML
Beta-prop_Aladin
Motif
Other DBs
NCBI-GeneID:
130462573
NCBI-ProteinID:
XP_056687096
UniProt:
A0ABM3QUR5
LinkDB
All DBs
Position
6:complement(143760243..143764676)
Genome browser
AA seq
325 aa
AA seq
DB search
MEKTVATLEKGTVCSAWNYSAQRLATGSINGLLTIFDSPDPASSSPFSPSSFQVHEGSIV
KVAWVPPEYGDAIACILDDGTLSLWEEVTGEGQSLQWKICTKFQNKSARVLDIQFGGSST
CLKLVVAYSDGYAKVYELQNPLELNTWQLQAEFQNVIDSVSKFAKASCLSASISWIPQIG
ESQQLSFVLGFNSDIPQLNSSKVWEFDQLHQRWLTVAELALPENTGDPVHAVAWAPNICR
PYEIISVATQMGIAIWHIGLHPDVNGHLSVEKIALLSGHQGEVWQMEWDMSGMTLASTGS
DGVVRLWQSNLNGVWHEQAVLEPTS
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atggagaaaacggtggcgacattggagaaaggaacagtatgctcagcttggaattacagc
gctcaaagattagctactggttcaatcaatggtcttctcaccatcttcgattctcctgac
cctgcttcctcttctcccttctctccttcctcttttcaggtgcatgagggtagcattgtg
aaggtggcatgggttcctccagagtatggagatgccatcgcgtgtattttggatgatggg
acgttatcattatgggaagaagttacaggagaggggcaatcacttcagtggaagatctgt
accaagtttcagaataaaagtgcccgtgtattagatattcaatttggaggatcctctact
tgtttgaagttggttgttgcatattcagatgggtatgccaaagtctatgagctccaaaat
cctttggaactgaacacttggcaacttcaggccgagttccagaatgtcattgactctgta
tctaaatttgcgaaagcttcatgcttatcagcatccatttcatggattccacaaataggt
gaaagccagcaattgagcttcgttctgggattcaattcagatataccacaactcaattct
tccaaggtctgggagtttgatcaactacatcaaaggtggcttactgttgcagagttggct
ttacctgaaaacactggtgatccggtgcatgcagttgcatgggctcccaatatttgcagg
ccgtatgaaataatatctgttgcaactcagatgggtatagcaatatggcatattggtttg
caccctgatgttaacggacacctctcagttgagaagattgctttgctatcaggtcaccag
ggcgaggtatggcaaatggaatgggacatgagcggaatgactttggcaagcaccgggagt
gatggggtggttaggctttggcagtctaatctgaatggtgtctggcatgagcaggcagtc
ttggaacctacctcgtag
DBGET
integrated database retrieval system
