Spinacia oleracea (spinach): 130470227
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Entry
130470227 CDS
T05137
Name
(RefSeq) RNA polymerase sigma factor sigE, chloroplastic/mitochondrial-like
KO
K03093
RNA polymerase sigma-I factor
Organism
soe
Spinacia oleracea (spinach)
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
soe03021
]
130470227
Transcription machinery [BR:
soe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
130470227
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
GerE
Sigma70_r4_2
Motif
Other DBs
NCBI-GeneID:
130470227
NCBI-ProteinID:
XP_056695864
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Position
3:complement(21400171..21406206)
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AA seq
521 aa
AA seq
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MGVVTISISASRASLGLSRRSTAQQSSSNGPLILGFKVDKNKKTALVAVSEPRRLHAETK
KENTKRLRSVTKPVKRLRATTTSIAEASPYAAEIDLNEAAAKLESIFKLSPATDVLDAEI
IDHVVKERRGRRRKSTEVDEEREKEGDSSVVRNRNRKAKRLSLAKRIELKNSKESKEEKA
VPLAQKKKVIKNEDEKIDELVREYSASTDLSSLDWKKMKIPPVLPSSEHTWLFKLMEPMK
ALNQVKENLRTELGRETAANELGEAMNMTVVEVRRHVGVGYAARNKLIKHNLRLVLFVMN
KYFQDFTNAPNFQDLCQAGVKGLITAIDRFEPRRKFQLSTYALFWIRHAIIRSMTVSSFT
RVPFGLESVRVEIQKAKLELMFELKRMPTEEEIMERVGISPERYKVVMRASNSVVSLHSR
HKVTQEEFIKGITDEDGVGSDKQRQPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDR
TLGEIAGNLSISREMVRKHKMKALMKLKHPTRVDYLQRHIS
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgaccatttcaatatcagcttctcgagcatcattaggattaagcagaaga
tcaacagctcagcaatctagttccaatggacccttaattctagggttcaaagtggacaaa
aacaaaaagacagccttagttgcagtaagtgaacctagacgtttacacgcagaaacgaag
aaagagaacacaaaaagattaagatcagtcacaaagcctgtgaaaagactacgtgccacc
acaaccagcatagctgaagcttctccatatgctgctgaaatagatcttaatgaagctgct
gctaaacttgaaagcattttcaagctgagtcctgcgactgatgttttggatgctgagatc
atcgatcacgtggtaaaagaaagacggggaagaagaaggaagagtacggaagtcgatgag
gaacgggaaaaagagggtgacagtagtgtggtgaggaacaggaacaggaaagctaaacgg
ttgagccttgcaaagagaattgaattgaagaatagcaaggaaagtaaggaagagaaggca
gttcctctagctcaaaagaagaaagtgattaagaatgaagatgagaagattgatgagctt
gtaagagaatactctgcttcaactgatttgtcaagcttggattggaagaagatgaagata
ccgccagttcttccttcttctgaacacacttggttgtttaagttgatggaaccaatgaag
gcccttaatcaagtaaaggagaacctgaggacagaactgggaagagaaacagcagctaat
gaattaggagaggcaatgaatatgactgtagttgaagtaagaagacacgtaggggttggt
tatgctgcaagaaacaagttgattaagcacaacctgaggctagtattgtttgtgatgaac
aaatatttccaagattttacaaatgcaccaaattttcaagacctatgccaagcaggagtg
aagggtctgattactgctattgatcgctttgaaccaaggagaaaatttcagctgtctact
tatgctcttttctggataaggcatgccatcattcgttcaatgaccgtttcaagctttact
cgtgtccccttcggtcttgaatcggtcagggtggaaattcaaaaggccaaactagaattg
atgttcgagcttaaaagaatgcctacagaagaagagataatggaaagggttggaatctct
cctgaaagatataaagtggtgatgagagcttcaaattctgttgtttccttacattctagg
cataaagtcacacaagaggagtttatcaaagggattactgatgaagatggtgttggaagt
gacaagcagaggcaaccagcccttcttagacttgcaatcgacgatgttcttgactctttg
aagccgaaagaaagcttggtaatccggcaaagatatggtcttgatggtaaaggagataga
acacttggagaaatcgctggaaacctcagcatttcaagagaaatggtcaggaaacacaaa
atgaaggcgttaatgaagcttaagcatccaactcgagtggattatcttcagcgtcacata
tcctga
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