Spinacia oleracea (spinach): 130472088
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Entry
130472088 CDS
T05137
Name
(RefSeq) exopolygalacturonase-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
soe
Spinacia oleracea (spinach)
Pathway
soe00040
Pentose and glucuronate interconversions
soe01100
Metabolic pathways
Module
soe_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
soe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
130472088
Enzymes [BR:
soe01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
130472088
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
130472088
NCBI-ProteinID:
XP_056698492
UniProt:
A0ABM3RS89
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Position
4:complement(159801340..159804683)
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AA seq
391 aa
AA seq
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MTRKGDVLSVLLILIMWFSQGVKGVKFFNVKDFGAIGDDHFDSTKAFQSSWNEACKWREK
AVIEIPRGNYLLRNLLFQGPCMGPINFHNSGTLKAHKINLGLNYWVEFRYVDGLAINGGG
YFDGQGSESWLKIMEDTTPMNFLPITLMLDFANNTRIENMNFINSKGSHIKLNGCKNISV
NQITILAPENSPNTDGINIALSRQIQVSNSKISTGDDCISILPGTEDVNITGTRCGPGHG
ISIGSMGLDPNELAVKGVNVKNCNFTNTQNGVRIKTWATKNIGKVAHISFESIVVNNASN
PIIIDQNYCPSHQCPKGDSHIQINDVKFVDIMGVSQTYVAVNFRCSKYKPCEVETRNINL
KYGSNKGPTISSCFNVKGVASGYQKPPSCIS
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgacaagaaagggagatgttttaagtgtgctactaatcctcataatgtggttctcacaa
ggtgttaagggggtgaaattcttcaatgttaaagattttggtgctattggtgatgaccat
tttgattctacaaaggcctttcagagctcgtggaatgaagcatgcaaatggagggagaaa
gcggtaattgaaatcccacgtgggaattacttgttgagaaatctattgtttcaaggccca
tgtatgggcccaataaatttccataattcaggcactctgaaggcccataaaatcaatctt
gggctcaactattgggttgagtttagatatgtagatggattggctatcaatggtggtggg
tactttgatgggcaaggctcagaatcatggctcaagatcatggaagacacaacccccatg
aacttcctccctataacattgatgttagattttgcaaacaatacaaggattgaaaacatg
aatttcatcaacagcaaaggtagccacatcaaactaaatgggtgcaaaaatattagtgtt
aaccaaattacgattttagcccctgaaaatagccctaacactgatgggatcaacattgcc
ctctcaaggcaaatccaagtatcaaattccaagatttctacgggagatgattgtatttca
atccttcctggaaccgaagatgttaacatcaccggcactcgttgcgggccgggccatggg
attagtatcggaagcatgggtttggatccaaatgagcttgccgttaagggagtgaatgta
aagaattgtaacttcactaatacccaaaatggtgtaaggattaagacatgggctactaaa
aatattggcaaagttgctcacatttcatttgagagcattgttgttaacaatgcaagcaat
cctatcatcattgatcagaattattgtccgtcacatcaatgtcctaagggggattctcat
attcaaattaacgacgtgaaattcgtggatataatgggagtttcacagacgtatgttgcg
gttaattttagatgtagtaaatacaaaccatgtgaagttgagacaaggaatataaatttg
aagtatggaagcaataaaggaccaacaatttcatcatgtttcaacgtcaagggcgttgct
tctggttaccaaaagccaccttcctgtatttcttag
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