KEGG   Serratia odorifera: NCTC11214_00038
Entry
NCTC11214_00038   CDS       T06612                                 
Symbol
vapC_1
Name
(GenBank) tRNA(fMet)-specific endonuclease VapC
  KO
K18828  tRNA(fMet)-specific endonuclease VapC [EC:3.1.-.-]
Organism
sof  Serratia odorifera
Brite
KEGG Orthology (KO) [BR:sof00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sof03016]
    NCTC11214_00038 (vapC_1)
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:sof02048]
    NCTC11214_00038 (vapC_1)
Transfer RNA biogenesis [BR:sof03016]
 Prokaryotic type
  tRNA degradation factors
   NCTC11214_00038 (vapC_1)
Prokaryotic defense system [BR:sof02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   VapC-VapB
    NCTC11214_00038 (vapC_1)
SSDB
Motif
Pfam: PIN
Other DBs
NCBI-ProteinID: VDZ51109
UniProt: A0A3S4DD35
LinkDB
Position
1:30363..30761
AA seq 132 aa
MLKYLLDTNTCIFTIKNKPTLVRERFNLNTSRLCISSVTLMELIYGAEKSQAPERNLAVL
EGFIARLDVLNYDAAAAAHSGQIRAELSRQGLPIGPFDLMIAGHARSQGLIVVTNNTREF
ERVDGLRIEDWC
NT seq 399 nt   +upstreamnt  +downstreamnt
atgttgaagtacctgctggacaccaacacgtgcattttcaccatcaagaacaaacccaca
ctcgtcagggagcgtttcaacctgaatacctctcgcctgtgcatcagctcggttaccctg
atggaactgatttacggcgcggaaaagagccaggcgccggaacgtaaccttgcggtgctc
gaggggttcatcgcgcgtctcgacgttctgaactacgatgccgcagctgccgcacacagc
ggtcaaattcgggccgaattgagccgacagggtctccctatcggtccctttgacctgatg
atcgccggacatgcccgcagccaggggctgattgtagtcaccaacaacacgcgggaattt
gagcgtgttgacgggttgcgtatcgaagactggtgctaa

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