Serratia odorifera: NCTC11214_00588
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Entry
NCTC11214_00588 CDS
T06612
Symbol
dnaQ
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sof
Serratia odorifera
Pathway
sof03030
DNA replication
sof03430
Mismatch repair
sof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11214_00588 (dnaQ)
03430 Mismatch repair
NCTC11214_00588 (dnaQ)
03440 Homologous recombination
NCTC11214_00588 (dnaQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_00588 (dnaQ)
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_00588 (dnaQ)
Enzymes [BR:
sof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11214_00588 (dnaQ)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11214_00588 (dnaQ)
DNA repair and recombination proteins [BR:
sof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11214_00588 (dnaQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
VDZ52216
UniProt:
A0A3S4ENU5
LinkDB
All DBs
Position
1:complement(523257..523994)
Genome browser
AA seq
245 aa
AA seq
DB search
MITTPTRQIVLDTETTGMNKLGVHYEGHRIIEIGAVEVINRRLTGRHYHVYVKPDRLVDP
EAYGVHGISDEFLADKPTFDQIADEFIEFIRGGELVIHNAAFDIGFMDHEFRMLQQDIPK
TETFCAITDSLLMARRLFPGKRNNLDALCSRYEIDNSKRTLHGALLDAEILAEVYLAMTG
GQTTMAFQMEGDTQQSDSTQDIQRIARPATSMKVIYASDDEVVAHESRLDLVAKKGGGNC
LWRAE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgatcactacaccaaccagacagatcgtactcgataccgaaaccaccggtatgaacaag
ttaggggttcattacgaaggccaccgcattatcgaaatcggtgcggtggaagtgatcaac
cgtcgcctgaccggtcggcattatcacgtttacgtcaagccggatcggctggtggatcct
gaggcttacggcgttcacggcatcagcgatgaattcctggcggacaagccgaccttcgat
cagatagccgatgaatttatcgaatttatccgcggcggtgagttggtcatccacaacgcg
gcgttcgatatcggctttatggatcacgaattccgcatgttgcagcaggacattccgaag
acggaaaccttctgcgccattaccgacagcctgttgatggcgcgtcgtctgttcccgggc
aagcgcaacaacctcgatgcgctgtgtagccgctacgagatcgacaatagcaagcgaacc
ttgcacggcgcattgctcgatgccgagatcctggccgaagtttatctggcaatgaccggc
gggcagaccaccatggcatttcagatggaaggggatacccagcagagcgattccacgcag
gatatccagcgtattgcacgcccggcgacgtcgatgaaggtgatttacgccagtgatgac
gaagtggtggcacacgaatcacggctggatctggtggcgaaaaagggcggcggtaactgc
ctgtggcgcgcggaataa
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