Serratia odorifera: NCTC11214_00946
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Entry
NCTC11214_00946 CDS
T06612
Symbol
ybiS
Name
(GenBank) Probable L,D-transpeptidase YbiS precursor
KO
K19235
L,D-transpeptidase YbiS
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sof01002
]
NCTC11214_00946 (ybiS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sof01011
]
NCTC11214_00946 (ybiS)
Peptidases and inhibitors [BR:
sof01002
]
Cysteine peptidases
Family C82
NCTC11214_00946 (ybiS)
Peptidoglycan biosynthesis and degradation proteins [BR:
sof01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC11214_00946 (ybiS)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
VDZ53092
UniProt:
A0A447KMJ4
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All DBs
Position
1:complement(852477..853397)
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AA seq
306 aa
AA seq
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MKMSIRALLTLFTALVAFSQAAFAVVYPLPAKDSRLVGQNIQIQVPADSKLPLESFAAQY
QMGLSNMLEANPGVDPFLPTPGSTLTIPQQLILPDAPRQGIIINSAEMRLYYYPKGSNTV
VVLPIGIGQLGKDTPLNWVTSVQRKKDGPTWTPTAKMREEYAADGEILPAVFPAGPDNPM
GLYALYVGRLYAIHGTNANFGIGLRVSHGCVRLRADDIKYLFDSVPVGTRVQFINEPVKA
SVEPDGSRYLEVHNPLSANEEELKSKDPVPVTITPAVGKVLMDAGINQSEVDAAIKARSG
MPVKVN
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgagcattcgcgcgttattaaccctgtttacggcactggttgcgttcagccag
gcagccttcgccgttgtatacccactgcctgccaaggatagccgcctggtggggcaaaat
attcaaatccaggttccagccgacagcaagctgccgctggaaagctttgccgctcagtac
cagatgggcctgagcaatatgctggaagccaacccgggggtggatccattcctgccaacg
ccgggcagtaccctgaccattccacagcagttgatcctgccagacgcgccgcgtcagggc
atcatcatcaacagtgccgaaatgcgtctgtactactacccgaagggcagcaacaccgtg
gtggttttgccaatcggcatcggccagttgggcaaggacacgccgctgaactgggtaacc
agcgtacagcgcaagaaggacggcccgacctggacgccgaccgccaaaatgcgtgaagaa
tatgccgcagacggcgaaatcctgccggcggtattcccggccggtccggacaacccgatg
ggtctgtacgcgttgtacgtagggcgtctgtatgccattcacggtaccaatgccaacttc
ggcatcggcctgcgcgtgagccacggctgtgtgcgtttgcgtgccgatgatatcaaatac
ctgttcgacagcgtgccggtcggcacccgcgtacagtttatcaacgagccggtgaaagcc
tcggtggagccagacggttcccgttatctggaagtgcacaacccgctttctgccaacgaa
gaagagctgaagtcgaaagatccggtgccggtaaccatcaccccagcggtcggcaaagtg
ctgatggatgcgggtatcaaccagagcgaagtggatgcggcaatcaaggcgcgttccggt
atgccggttaaagtgaactga
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