Serratia odorifera: NCTC11214_01017
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Entry
NCTC11214_01017 CDS
T06612
Name
(GenBank) ATP-dependent helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
NCTC11214_01017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
MZB
TGT_C2
Motif
Other DBs
NCBI-ProteinID:
VDZ53300
UniProt:
A0A3S5D6X4
LinkDB
All DBs
Position
1:917429..921619
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AA seq
1396 aa
AA seq
DB search
MAKQARDEAKNLRDWDMPEEAILSEEKAERIEQAIQKATGGKVNTVLTSLTWQEMINDLK
DKADIQGSILQYNHYLKPEIFTENSGPLKLSDMLLFREFMRRPKRTNSLETQGLVQVGYQ
GLEKVHKTPVHWQEQDLTLEDWRDFLKVTLDFYVRESNFIQLDLELKNWIGSRFSSKFVR
NPESKDPDDNQVKRWPQIRHGNVTHRLVKLLILGAKFSTVNTVTIDIVNAWLKEAWLQLT
GPLAVLKPDGNRFYLPKKHLTFSLVQKASICPVTNKLLDTTFKGLTPYLPRHIPFERLTN
TQYSAYMAQEVMLPEVWEHDHSQLDYAEGLAQVREWVSQDPLVAHLRSQNVWTDINDRVV
EGGFYYRTAEHSAQQSADRLQSYEKMFKNGQLNVLNCSTTMEMGVDIGGISAVVMNNVPP
HPANYLQRAGRAGRSKESRATSYTLCKGNPHDQQVFANPLWPFETVIPAPMVAMNSERLV
QRHVNSLLLSEYLCHVVGETKKEKTNLNSEWFFGEEFGQSVCNSFKIWLERPTLTIDDAL
ERLVKGTALHGARPELLREKTFHAITNLQKRWLGIFQDLVKQEKESQPNTPYRKRLELEK
KRHCDEYLLRDLAARTFLPGYGFPTDVVNFDNFTMEDYIREKTYKSRNKSDREDNVSRYK
GLPSRNLSVAIREYAPGAEIILDGRVFRSAGVSLHWHNLNADTNEVQRLDRAWRCQKCGT
LGYEEGIGSSIELFCTNGDCGERITRDNTRQVLQPAGFVTDAYDSVTNNIETMKFIPVVP
AWVFVKAERLPLPNPEMGFMASGANGHVFQQSMGEGGHGYALCLSCGRAESMISEKDAPK
SMEAHYPPRPGKADRDSQNQRIICPGSTALNTKVTLGALARTDVFELILRRPQDGEYIPD
SSEEGRIVAMTLAVALRRALAGVLGVSAAELGYAVRPVRLESEESVLAVQLYDVISGGAG
FASSAPLHIEAILQGMVKQLGCTHCDTACSDCLLDSQTRHDHDHLDRKAALAWLGDDFSH
YIGLPDEVKFSLPDAQYCPGTIEDAVRRAINEGADKLTLWMNGPLNEWDLYARQFRAAIH
NYRLKDNVAVEIVIPASIDDPEVLHELAQFAAIGVRLCHAEQEVSFPIVAQIAFADRVIT
LASRSQQATVPGPHWHQNDELVVRSQCYRPTALREFALPATTANYTELVKDIQIHKELNG
PFSQFGQRFWDVLFDDHEKVQNLMKTNRITHIHYTDRYLQNPVALALLSALLKPLKTLMT
KDAEVVIDTLFKNKDRPGNRPSHDWMSEADFQDFADQWFAASMGKAADITVFDYPRDIPH
HRKLMVNFDNGQVLKIRFDQGMGYWRIDFPYVWRSFDFNDDVTSQLHKMAKACMEGKVIN
GEENWSTDVVVEVMEP
NT seq
4191 nt
NT seq
+upstream
nt +downstream
nt
atggctaaacaggccagagatgaggcgaaaaacctgcgtgactgggatatgccggaagag
gcaattctctctgaagaaaaagcggaacgtattgaacaggccatacaaaaagcaacaggt
ggaaaagttaataccgttttaacctcgctaacctggcaagaaatgattaatgatcttaaa
gataaggcagatatccaaggctcgattctgcagtacaaccactatcttaaacctgagatt
ttcactgaaaacagcgggcctctgaagctttcagacatgcttttattccgtgaatttatg
cgtcgaccgaagcgaaccaatagccttgaaacgcaagggctggtgcaggttggttatcaa
gggttggagaaggtacataaaacccctgtccactggcaggaacaagatctaactctggag
gactggcgtgattttctgaaagtcacactggatttttatgtcagagaaagcaacttcatc
caactggatttagaactgaagaactggattggcagccgtttctcatcgaaatttgtacgc
aaccctgaatcaaaagaccctgacgataaccaggtcaaacgttggccacaaattcggcat
ggcaatgtcacccatcgcttggttaagctactaatactcggagcaaaattcagcaccgta
aacacggttaccatcgatatagttaacgcatggttgaaagaggcctggcttcaattaacc
ggccctctggctgtgttaaaaccagacggtaaccgtttttacttgccgaaaaaacatctg
acattttctctggttcaaaaggcgagtatttgccctgttaccaataaattgttggatacc
actttcaaaggactcaccccgtacctacccagacatatcccgtttgaacgcctgaccaat
acgcaatatagcgcctatatggcccaggaagttatgctacctgaagtctgggaacacgat
cattcgcagttagattatgccgaagggttggcacaagtccgggaatgggtatcgcaagac
ccacttgtcgctcatttacgctcgcaaaacgtctggacggatattaacgaccgcgtggtg
gaaggaggcttttactaccgcactgctgagcattcagcacaacaatcagcagatcgtctg
caaagctacgaaaaaatgtttaaaaacgggcagctcaatgtccttaactgttcgactact
atggaaatgggcgtggacattggcggtatttccgccgtagtgatgaataacgtccctcct
catcctgcaaactatttacagcgtgcggggcgagccggacgtagtaaagaatcccgcgca
acctcctacacgctgtgtaaagggaacccacacgatcagcaggttttcgccaatcctctc
tggccatttgagaccgtgatccccgcaccgatggtggcaatgaactcggaacgattggta
caacgccacgttaattcgcttctgctgtcagaatatttgtgtcatgtagtgggagaaact
aagaaagaaaaaaccaacctgaatagcgaatggttctttggtgaagagtttgggcagtct
gtatgtaacagctttaagatttggcttgaacgcccgaccctgacaattgatgacgcgctt
gagcgtctggtaaagggtaccgcgctgcatggtgcaaggccggaattattgcgggaaaaa
actttccatgcgattactaatttacagaaacgttggctggggattttccaggacctcgtg
aaacaggaaaaggaatcacagccaaatactccatatcgtaagcgcctggaactggagaaa
aaacggcattgcgatgagtatctattgcgcgacttggcagcgcgaacgttcctacctggc
tatggtttcccgacggacgttgtgaactttgataacttcactatggaagactatatccgc
gagaaaacgtataaaagccgtaataagagtgaccgtgaagataacgtttcacgttataaa
ggactgccttcacgcaacctgtctgttgccattcgtgaatatgcgccaggggcggagatc
attctggacggacgtgtgttccgttccgctggtgtatcactgcattggcacaatctcaat
gctgataccaatgaagtccaacggttggaccgagcctggcggtgccagaaatgcggtacg
ttaggctatgaagaaggtattggtagctcaatagaattattctgcactaacggcgactgc
ggtgagcgaattactcgtgacaacactcgacaggtgctacagcccgctgggtttgtcact
gatgcttatgattcggtaacgaacaacatcgaaacgatgaaatttatcccggtagttccg
gcatgggtatttgttaaggcggagcgtttgccactaccaaacccggagatgggctttatg
gcttcaggcgctaatgggcatgtattccagcagagtatgggcgagggtgggcatggttat
gcactgtgcctgagctgcggtcgcgcggagtcgatgataagcgaaaaagacgcgccaaaa
tcaatggaggcgcattatccgccacgtccaggaaaagccgaccgtgacagccagaatcag
cgaattatttgtcctggttctaccgcattaaataccaaagtcaccctgggagcgttagca
cgtaccgatgtatttgaactgattttacgtcgtccacaggacggtgagtatatccctgat
agctcagaggaagggcgtattgttgctatgacgctggctgttgcgctgcgtcgggcgctt
gcgggtgtactgggtgtttctgctgcggagttgggctatgccgtgcgtccggtcaggttg
gagagcgaggaatcagtactggcagttcagctttacgacgtcatcagcggcggtgcgggg
tttgcttccagtgcaccattgcatatcgaagcgatactgcagggaatggtcaaacagcta
gggtgcacccactgcgataccgcctgtagcgattgtttactcgattcgcaaacgcgtcac
gatcatgaccatctggatcgcaaagctgcactggcctggctaggggatgatttcagccac
tatattggtttgccagacgaggtgaaattctcgctacccgatgcgcagtattgccctggt
acaattgaggatgcagtccgtcgcgcaattaacgaaggagccgataaactcacactatgg
atgaacgggccgctcaacgaatgggatttatatgcccgacagttccgcgcagcaatccat
aactaccggcttaaagataatgtcgcggttgagattgtcattcccgctagtattgacgat
ccggaggtgttgcacgaactggcgcagtttgcggctattggcgtgcggttgtgccatgcc
gaacaggaagtgtcattccctattgtggcgcagatcgctttcgccgatcgtgtcataacg
ctagcatcacgcagccagcaagccacggtgccgggaccgcactggcatcagaatgacgag
ctggtggttcgcagccaatgctatcgccctactgctctgcgtgagtttgcactaccagca
accacagcgaactatactgagctggtgaaagacattcaaattcataaagagttgaatggc
ccgttttcgcagtttggccaacgcttctgggatgtgctttttgacgaccatgaaaaagta
caaaacctgatgaaaacaaaccgaattacccatattcactataccgatcgctatctgcaa
aacccggttgcgctggcattactgagcgctttacttaagcctctgaaaaccttaatgacc
aaagatgcggaagtagtgattgataccttattcaaaaacaaagatcgcccaggcaatcga
ccgtcccacgactggatgagtgaagctgattttcaggattttgctgaccagtggtttgct
gcatcaatgggtaaggcggctgacataacggtcttcgactacccacgagatattccacat
catcgcaaattgatggtgaattttgacaatggccaggtgctgaagatccgctttgatcag
gggatgggctactggcgtatcgacttcccatatgtctggcgcagctttgacttcaatgat
gatgttacttctcagctccacaaaatggctaaagcttgtatggaaggaaaggtgattaac
ggagaggaaaactggtcaacggatgtggtagttgaagtgatggagccttaa
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