Serratia odorifera: NCTC11214_01108
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Entry
NCTC11214_01108 CDS
T06612
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sof03016
]
NCTC11214_01108 (truB)
Enzymes [BR:
sof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
NCTC11214_01108 (truB)
Transfer RNA biogenesis [BR:
sof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC11214_01108 (truB)
Prokaryotic type
NCTC11214_01108 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
FoP_duplication
Motif
Other DBs
NCBI-ProteinID:
VDZ53549
UniProt:
A0A447KMP5
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All DBs
Position
1:complement(1002910..1003854)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGLSSNDALQKVKRCYNANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVIARLGQRTDTSDADGQVVQERPVNVTREQLDAALDTFRGNIQ
QVPSMYSALKYQGKKLYEYARQGIEVPREARSITVYELTFIRWEGDELELEIHCSKGTYI
RTITDDLGELLGCGAHVIYLRRLQVAKYPIERMVTLEQLSALLEQAQAEGIAPGELLDPL
LMPMDSPVENFPEVNLLPAVAGYVKQGQPVQAAGAPAHGMVRITEGDEHKFIGVGEIADD
GRVAPKRLVVEHFD
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgccctcgtcgccgcggccgtgacattcacggcgttttgttgctggacaagccg
caggggctgtcttccaacgacgcgctgcaaaaagtaaaacgttgctataacgccaatcgc
gcgggccataccggcgcgctcgatccgctggcgaccggtatgctgccgatttgcctgggc
gaagcgaccaagttttcccagtttctgctcgactccgacaagcgttatcgggtgatagcc
cgtctgggccagcgcaccgatacctcggatgcggacggccaggtggtgcaagagcgcccg
gtcaacgtgacccgcgagcaactcgacgcggcattggacaccttccgcggcaacattcag
caagtgccatcgatgtattccgcgctgaagtatcagggtaagaaactgtacgaatacgcg
cgtcagggcattgaagtgccacgtgaggcgcgcagcatcacggtgtacgaactgacgttc
atccgctgggaaggggatgagctggagctggaaatccactgctccaaaggaacctacatc
cgcaccattaccgacgatctcggcgaactgctgggctgcggcgcgcacgtgatttatctg
cgtcgtttgcaggtagcgaaatatccgatcgaacgcatggtgacgctggaacagctgagc
gcattgctggaacaggcgcaggccgaaggcatcgcgccgggtgaactgctcgatccgctg
ctgatgccgatggacagtccggtggaaaacttcccggaagttaacctgctgccagcggtg
gcgggctacgtcaagcaggggcagccggttcaggctgccggcgcgccagcgcacggtatg
gtacgtatcaccgaaggcgatgagcataaattcatcggcgtcggtgagattgccgacgac
gggcgggtggcgccaaaacggctggttgtcgagcatttcgactga
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