Serratia odorifera: NCTC11214_01143
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Entry
NCTC11214_01143 CDS
T06612
Name
(GenBank) Family of uncharacterised function (DUF490)
KO
K09800
translocation and assembly module TamB
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sof02000
]
NCTC11214_01143
Transporters [BR:
sof02000
]
Other transporters
Pores ion channels [TC:
1
]
NCTC11214_01143
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TamB
Motif
Other DBs
NCBI-ProteinID:
VDZ53642
UniProt:
A0A3S4DE59
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All DBs
Position
1:complement(1033233..1037051)
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AA seq
1272 aa
AA seq
DB search
MSLVKKICLGFLIVLLLLVGGVAFLLGTTSGLHMTLNAAARWVPGLDIASVTGGWRDLTL
KGVKYQMPGVTVNVGQFHLSLDLSCFKRSSLCVNALTADDVDVVVKTSEMTPSEPVADSD
EPAANLSTPYPITLRKLALNNVKVSVDDTAISLGEFSTGAQWQERALTLMPTRIGALLIA
LPKTPQNPLPEAMQPAVEVARQVGDRALETEKPAPKPEETPLGETLKALFAKPLLPDLPE
VRLPLDITVKEIRGEQLRLTGDTDVLITSLLLQASTLDHHLQLDKFDVKSPQGTLFAHGQ
ATLKDQWPVEMVANGTLNVEPLKGEKVKLNVGGALREALSVAMNLSGPVGAQLDLQTQLA
EAGLPLALTLEGKRLRWPLSGEAQYQVDGLRLRFNGKATDYALSTRANIKGQDLPPAVLT
LDGKGNVEQFKLQRLRLAALQGHADLTALVDWSKAISWTSQLQLSGINTAKQWPEWPAKL
DGKITTRGSLYGGSWQLQVPTLQLDGNVKQNKVSARGSLSGNAAGQWKIPAVDLALGRNR
LNVKGQLDEKSWNLDADIDAPQLDGALPGLGGTAKGQLKLRGNLQAPQLLADLTASGLQW
QALHIRRVKVDGDVRSTDQIQGQLAVRVEQLKQDALEVNLLTLDAKGSEKQHALQLKIDG
KPVSGQLALSGSFDRQQQRWRGTMNNTRFDTPVGEWRLTRAIALDYLNTQQKISVGPHCW
QNPDAELCVPKTIEAGASGQASVVLNRFDLKMIKPFLGPDTALSGVFTGRADVSWQPGAA
LPQAKVALVGNGVKVVQQVQGNPLPIAFDTLNLNAGITNGRAQADWRIKLNNNGQFDGNV
QVTDPQTRRNLSGNVNITNISLALINPALMQGEKAAGMLNANLRLGGNAQKPLVFGRLAL
DKVDIDGSWMPFDMTDGRLAINFNGMNSTLDGLITTTQGQLNMTGDADWSDINAWRARIA
AKGNKLRVTVPPMVRLDVSPDLVFEATPQLFSLNGNVDIPWARITVQELPESAVGVSSDE
VMLDRQLKPIQPKTASIPINSNLMIHVGDDVRLDAFGLKARLKGDLKVVQDKRGLGLNGQ
IDIPAGRFHAYGQDLIIRKGQLMFSGPPDQPLLNMEAIRNPEATEDGVTAGVRVTGLADA
PKLEVFSDPAKSQQEALSYLLRGQGLSSSGADGNAMTSMLVGLGVAQSGQLVGKIGEAFG
VSNLALDTAGVGDSSQVVVSGYVLPGLQVKYGVGIFDSLATLTLRYRLMPKLYLEAVSGL
DQALDLLYQFEF
NT seq
3819 nt
NT seq
+upstream
nt +downstream
nt
atgagcctggtaaaaaagatctgtcttggatttctgattgtgctgctgttgctggtgggt
ggcgtggcgttcctgttgggcaccaccagcggtttgcatatgaccctgaacgcggcggcg
cgctgggtgccggggctggacattgccagcgtcaccggcggctggcgcgatctgacgctg
aagggcgtcaagtatcagatgcctggggtgacggtcaacgtcggtcaattccacctttcg
ctcgatctgtcctgtttcaagcgtagctcgctgtgcgttaatgcgctgaccgccgacgac
gttgacgtggtggtgaagaccagcgaaatgacgccatcggagccggtcgccgacagtgac
gagccggccgccaatctcagtacgccgtacccgattaccctgcgcaaactggcgctgaac
aatgtcaaggtcagcgttgacgacaccgccatttcgctgggtgaattcagcaccggtgcg
caatggcaggagcgcgcattgaccctgatgccgacccggatcggtgccttgctgatcgcg
ctgccaaaaacgccgcaaaacccgttgccggaggcgatgcaaccggcggttgaggtagcc
aggcaggtcggcgatcgtgcgcttgagacagagaaaccggcaccaaagccagaggaaacc
ccgctgggggaaacgctgaaggcgctgtttgccaagccgctgttgccggatttgccggag
gttcgcctgccgctggatatcacggtgaaggagatccgcggcgagcagctgcgcctgacc
ggcgataccgacgtgctgatcaccagcctgctgttgcaggccagcacgctggatcaccat
ttgcaactggataagttcgacgtcaaatccccgcagggcacgctgttcgcccacgggcag
gcgacgttgaaagaccagtggccggtggagatggtcgccaacggcacgctgaacgtggag
ccgctgaagggcgaaaaagtgaagctgaacgtcggtggcgcgttgcgtgaggcgttaagc
gtggcgatgaatctgtccgggccggtgggggcgcagctggatctgcaaacgcaactggcg
gaggctggtttaccgctggcgctgacgctggaaggcaaacggctgagatggccgcttagc
ggtgaagcgcagtaccaggttgatggtttacgcctgcgtttcaacggcaaggccaccgat
tatgcactgtcgacgcgtgccaatatcaaaggccaggatctgccaccggcagtgctgaca
ctggacggtaaaggtaacgtcgagcagttcaaactacaacgtctgcgactggcggcgttg
cagggccatgccgatctgaccgcgctggtggactggagcaaggccatcagctggacgtca
cagttgcagttgagcggcatcaataccgccaagcagtggccggagtggccggcgaagctc
gacggcaaaatcaccactcgcggtagcctgtacggcggcagttggcaactgcaggtgccg
acgttgcaactggacggcaacgtcaagcaaaacaaggtatcggcacgcggctcactcagc
ggcaacgccgccgggcaatggaaaatccccgcagtcgatctggcgttagggcgtaacaga
ctgaatgtgaaagggcaactggatgagaaaagctggaatctggatgccgatattgacgca
cctcagttggacggcgcgctgccggggctcggtggtaccgcaaaaggccagctgaaactg
cgtggtaatctgcaggcgccacagctattggcggatttgaccgcctccggcctgcaatgg
caggcactgcatatccggcgggtgaaggtggacggcgacgtgcgctccaccgatcagatc
caggggcagctggcggtgcgggtagagcagctcaagcaggacgcgctggaagtaaacctg
ctgacgctggatgccaaaggcagcgaaaaacagcatgcgttgcagttgaagatcgacggc
aaaccggtatctggtcaactggcactttccggcagttttgatcgccagcagcaacgctgg
cgtggcaccatgaacaacacccgctttgatacgccggttggtgaatggcgtctgacgcgg
gctattgcgctcgactacctcaatacgcagcaaaaaatcagcgtcgggccacactgctgg
caaaatccggatgccgagctgtgcgtgccgaaaaccattgaggccggcgccagtggccag
gccagcgtggtgctcaaccggttcgatctgaaaatgatcaaaccgttccttggcccggac
accgcgctgagcggcgtgtttaccggccgcgccgacgttagctggcagccgggcgctgcg
ctgccacaggccaaggtggcgctggtgggcaacggggtgaaagtggtgcagcaggtgcag
ggtaacccgctgccgatcgcctttgatacgctcaatcttaatgctggcatcaccaatggc
cgggcgcaggccgactggcgcatcaagttgaacaataacggccagtttgacggcaatgtg
caggtcaccgacccgcagacgcgacgcaatctcagtggcaacgtcaatatcaccaatatc
tcgttggcgctgattaacccggcgctgatgcagggtgagaaagccgccggtatgttgaac
gctaatctgcggctgggtggcaatgcgcaaaaaccgctggtgtttggccggttggcgctg
gacaaggtggatattgacggtagctggatgccgttcgacatgactgacggccgcctggcg
atcaactttaacggcatgaattcgacgctagacggcttgatcaccaccactcagggccag
ttgaacatgaccggcgatgccgactggagcgatatcaacgcctggcgcgcacgcattgcc
gccaagggcaacaagttacgggtgacggtaccgccgatggtccgtctcgacgtgtctccc
gatctggtgttcgaagcgacgccgcaattgttctcgctcaacggcaacgtcgatattccc
tgggcgcgcattacggtgcaggaactgccggaaagcgcggtgggcgtttcgtctgacgaa
gtgatgctggatcggcagctgaagccgattcagccgaaaaccgcgtcgataccgattaac
agcaacctgatgattcacgtcggtgatgatgttcggttggacgcctttggcctgaaagcg
cggctgaaaggcgatttgaaagtggtgcaggacaagcgcgggctggggctgaatggccag
attgacatcccggcaggccgcttccatgcttatggtcaggatctgatcatccgcaaaggg
caactgatgttctccgggcccccggaccagccgctgctcaacatggaagcgattcgtaac
ccggaagccaccgaagacggcgttaccgccggcgtgcgcgtcaccgggctggcggatgcg
cccaagctggaggtattctccgatccggccaaatcgcaacaggaagcattgtcttatctg
ctgcgcggccagggtttgagcagttccggtgccgacggcaacgccatgacgtcaatgtta
gtgggtctgggggttgcacaaagtggtcaacttgtgggtaaaatcggcgaggcgtttggc
gtaagtaatttggcccttgatactgcgggagtgggtgatagctcccaggttgtcgtgagc
ggctatgtcctccctggcttacaagtaaaatatggggtgggcattttcgattcgctggcc
acgctgacgttgcgttaccgcctgatgcctaagttgtatctggaagcggtgtccggtctc
gaccaggcactagatttgctctatcagtttgagttttag
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