Serratia odorifera: NCTC11214_01251
Help
Entry
NCTC11214_01251 CDS
T06612
Symbol
rsmB
Name
(GenBank) Ribosomal RNA small subunit methyltransferase B
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sof03009
]
NCTC11214_01251 (rsmB)
Enzymes [BR:
sof01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
NCTC11214_01251 (rsmB)
Ribosome biogenesis [BR:
sof03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NCTC11214_01251 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
Methyltransf_31
FtsJ
Methyltransf_25
MTS
Methyltransf_37
Methyltransf_5
Cons_hypoth95
Methyltransf_12
Methyltransf_11
Methyltransf_33
Methyltr_RsmF_N
Methyltransf_15
Ubie_methyltran
TRM5-TYW2_MTfase
Motif
Other DBs
NCBI-ProteinID:
VDZ53971
LinkDB
All DBs
Position
1:1133175..1134464
Genome browser
AA seq
429 aa
AA seq
DB search
MKNNYNLRSIAAQAIGQVLDQGQSLSTILPSLQKNISDKDRALLQELCFGTLRVLPQLEW
CIQQLMAKPMVGKQRTLHYLLMVGMYQLLYTRIPAHAALAETVNGAVALKRPQLKGLING
VLRQFQRQQDQLLQRAANNDSRYLHPSWLLKRIQQAYPEQWEHIVEANNQKPPMWLRVNR
LHHTRDEYLKLMEQAGIAAAPHAEYRDALRLLSPCAVNELPGFAEGWVTVQDASAQGCVD
LLDPQDGEQILDLCAAPGGKTTHILEAAPKAHVMAVDIDEQRLSRVNENLQRLRFSAEVK
QGDGRTPQQWCGDKQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIAELASLQAEIMDAI
WPHLKPGGVMVYATCSILPQENNEQVLAFLQRHADAQRVETGKQHQPGRQNLPHPEDGDG
FFYAKLIKL
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacaactacaacctccgcagcattgctgctcaagccatcggccaggtattggat
caggggcaatcactcagcaccatcctgccgtcattgcagaaaaacatctcggacaaagac
cgcgcactgttacaggagctgtgttttggcaccttacgcgtcttgccgcaactggaatgg
tgcattcagcagttgatggccaaaccgatggtcggaaaacaacgcacgctgcactatctg
ctgatggttggcatgtaccaattactgtatacccgtattcctgcgcacgcggcgctggca
gaaacggtaaacggcgccgttgcgctaaagcggccacagctcaaggggctgattaacggc
gttttgcgtcagttccagcgccagcaggatcaattgctgcaacgcgcggccaacaatgac
agccgctatttgcacccaagctggctattgaaacgcatccagcaggcctatcctgagcag
tgggaacacatcgtcgaggccaataaccagaaaccgccaatgtggctgcgggtaaaccgg
ctgcatcacacgcgcgatgaatatctcaaactgatggaacaagccggcatcgccgccgcg
ccacacgcagaatatcgtgatgcgctgcgtttattgtcgccatgcgcggtcaacgagctg
cccggctttgccgagggatgggtcaccgtgcaggatgcctctgcacaaggctgcgtcgat
ctgctggatccgcaggatggcgagcagatcctcgatctgtgcgcagcccctggcggcaaa
accacgcatatcctcgaagcggcaccaaaagcccatgtgatggcggtcgacatcgacgaa
cagcggctgagtcgcgtgaacgaaaatctccagcgtctgcgattcagcgccgaggtcaag
cagggtgatggccgtacaccgcagcaatggtgcggcgataagcaatttgatcgcattctg
ttggatgcgccatgctctgccaccggggtcatccgccgccatcctgatatcaaatggctg
cgccgcgatcgcgacattgccgaattggccagcctgcaggcggaaatcatggatgccatt
tggcctcacctgaagcctggcggtgtgatggtgtatgccacctgctctatcctgccacag
gaaaacaatgagcaggtactggcctttttacagcgccatgccgacgcacaacgtgtagaa
accggtaagcaacatcaacctggccgacagaaccttcctcatcctgaagatggcgatggc
ttcttttacgctaagctgattaaactgtaa
DBGET
integrated database retrieval system
