Serratia odorifera: NCTC11214_01617
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Entry
NCTC11214_01617 CDS
T06612
Symbol
rfaL
Name
(GenBank) O-antigen ligase
KO
K02847
O-antigen ligase [EC:
2.4.99.26
]
Organism
sof
Serratia odorifera
Pathway
sof00540
Lipopolysaccharide biosynthesis
sof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
NCTC11214_01617 (rfaL)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sof01005
]
NCTC11214_01617 (rfaL)
Enzymes [BR:
sof01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.26 O-antigen ligase
NCTC11214_01617 (rfaL)
Lipopolysaccharide biosynthesis proteins [BR:
sof01005
]
Core region
NCTC11214_01617 (rfaL)
BRITE hierarchy
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GFIT
Motif
Pfam:
Wzy_C
Microp_apicomplexa_19
Motif
Other DBs
NCBI-ProteinID:
VDZ55047
UniProt:
A0A447KPD3
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Position
1:1456266..1457507
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AA seq
413 aa
AA seq
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MPSEKRPHPAFSYLIFLGCAIAFCTIPFGVETGRNIFYISSYISFIALCFNFRFYTKNKV
HLTLFLSLCLLGAASMIWAPLNKQPDDYVNIYRSYFSTGKLQLATAFILLIALNERLDFQ
KSYIAVAIGGALAVNAYAIYQGLWLHYPRVQLNFDRATIVAYIITAINLVMLHAVLLLKT
RYRLMLFLLAFIVSFSVIGLTGTRAAMLVFPVMVAIFVFTSREFFSRRQKMTIALAFPLL
LLLSAMIFKSQIEQRIHDFHQDMASINDPQKDNSIMSRLSMQRTGFHAGNQALLGQSAEQ
RAKEITAMVKQDPELMGVMPYLTVHLHNELIEAYSLKGIVGAVLLLTFYLTYIFAALRIY
NNVLLFTVMLSLIAFGLTDVIFFSTEGTVMFCLAIIASVISMKKTPDAQDLRQ
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgccaagtgagaaacgtccacatcctgcttttagctacctgatctttttaggctgcgcg
atcgctttttgcaccattccttttggcgttgagacagggcgaaacattttttatatttct
agctacatctcttttatcgccctgtgttttaacttcaggttttataccaaaaacaaagtc
cacctgacgctattcttatccctgtgcctgttgggagccgcaagcatgatctgggctcca
ctcaataaacagccggatgattatgtaaatatttaccgcagctatttctctaccggcaaa
ttacagctggccaccgcatttattttgcttattgcgctgaatgaacgcctggattttcaa
aaaagctatatcgccgttgccattggcggcgcgctggccgtcaacgcttacgccatctac
caggggttatggctgcattatccgcgcgtacagctcaacttcgatcgcgccaccatcgtt
gcctatatcatcaccgccattaatctcgtcatgctgcatgcggtattgctgctgaaaaca
cgctatcggttgatgctgttcctgttggcgtttatcgtcagtttctcggtgatcggcctg
accggcacgcgggctgcgatgctggtgttcccggtgatggtggctattttcgtcttcacg
tcgcgcgagtttttctcgcgtcgccagaaaatgaccatcgccttggctttcccgttgctg
ttgctgctgagtgcgatgatcttcaagtcgcaaatagaacaacgcattcacgacttccat
caggatatggcgtcgatcaacgatccgcagaaagacaattccatcatgtcacgcctatcg
atgcagcgcaccggcttccatgccggcaaccaggccctgctgggtcagtcagccgagcag
cgggccaaagaaataaccgccatggtcaaacaggatcctgaactgatgggggtcatgcct
tacctgaccgtgcatttgcataacgaacttatcgaagcctattcgttgaaaggtattgtg
ggtgccgtgctgctgctgacgttttatttgacctacatttttgccgcgttaagaatatat
aacaacgtcttgctgtttaccgtcatgctgagccttattgcctttggccttaccgacgtt
attttcttcagtaccgaaggcaccgtcatgttctgcctggcgattattgccagcgtcata
tccatgaaaaaaacgcctgatgcacaggatcttcgtcaatga
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