Serratia odorifera: NCTC11214_01628
Help
Entry
NCTC11214_01628 CDS
T06612
Symbol
mutM
Name
(GenBank) Formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sof
Serratia odorifera
Pathway
sof03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NCTC11214_01628 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_01628 (mutM)
Enzymes [BR:
sof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
NCTC11214_01628 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
NCTC11214_01628 (mutM)
DNA repair and recombination proteins [BR:
sof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
NCTC11214_01628 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
zf-dskA_traR
Motif
Other DBs
NCBI-ProteinID:
VDZ55078
UniProt:
A0A447KP63
LinkDB
All DBs
Position
1:complement(1467802..1468611)
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGHSIQYAVVRNARLRWPVSEQILALSDRPVRSVQRRAKYLL
IELDHGWIIVHLGMSGSLRMLAEESEAGKHDHVDLVMSNGMILRYTDPRRFGAWLWCDDL
AASNVLAHLGPEPLSEAFDGQYLFDKSRNKRTLIKPWLMDNKLVVGVGNIYASESLFTAG
ILPDRQAGSLTRAEADLLAETIKAVLLRSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GEPCRVCGTPIESAKHGQRSTFFCRRCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgccagaagttgaaaccagccgtcgtggtatcgagccttatcttgttggc
cacagtattcagtacgccgtggtgcgcaatgcacgtttgcgctggcctgtctcagaacaa
atcctggcattgagcgaccggccggtgcgcagcgtacagcgtcgtgccaaatacctgctg
attgagctggatcacggctggataatcgtacatctcggcatgtcaggcagcctgcgtatg
ctggcggaagagagtgaggcgggcaagcatgaccacgttgacctggtaatgagcaacggc
atgatcctgcgctacaccgatccacgtcgtttcggtgcctggttatggtgtgacgacctg
gcagccagcaacgtgttggcccacctggggccggaaccgttgagcgaagcgtttgacggc
cagtatctttttgataaatcacgtaacaagcgcaccctgatcaaaccctggctgatggat
aacaaactggtggtgggcgtcggtaatatttatgccagcgaatcgctgtttaccgctgga
attctgcccgaccgtcaggccgggtcgttgacgcgggccgaagctgacctgctggcggag
accatcaaggcggtattactgcgttcgatcgagcagggtggcaccacgttgcgggatttc
ctgcaatcagacggcaagccgggatattttgcgcaggaattgcaggtgtatgggcgagcg
ggggaaccttgccgtgtttgcggcacgccgattgaaagcgccaaacacgggcagcgcagc
actttcttttgccgccgctgccagcattga
DBGET
integrated database retrieval system
