Serratia odorifera: NCTC11214_01686
Help
Entry
NCTC11214_01686 CDS
T06612
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
sof
Serratia odorifera
Pathway
sof03030
DNA replication
sof03410
Base excision repair
sof03420
Nucleotide excision repair
sof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11214_01686 (polA)
03410 Base excision repair
NCTC11214_01686 (polA)
03420 Nucleotide excision repair
NCTC11214_01686 (polA)
03440 Homologous recombination
NCTC11214_01686 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_01686 (polA)
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_01686 (polA)
Enzymes [BR:
sof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11214_01686 (polA)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NCTC11214_01686 (polA)
DNA repair and recombination proteins [BR:
sof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NCTC11214_01686 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NCTC11214_01686 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
DUF2529
Prok-E2_E
HHH_5
Motif
Other DBs
NCBI-ProteinID:
VDZ55271
UniProt:
A0A3S5D743
LinkDB
All DBs
Position
1:complement(1520860..1523661)
Genome browser
AA seq
933 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSAGEPTGAMYGVLNMLRSLLLQYQPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHRMVKAMGLPLLVTPGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNTILGPQEVCDKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDTLYGNLDGIAALSFRGAKTMAAKLEQNK
EVAYLSYQLATIKTDVELEITCADLTVAEQDADQLQQLFKHYEFKRWLADVEAGTWLQNK
KGNGAKVANGPKPSSVTAETPKAVAEAKLSQEGYVTILEESTFVEWLERLKKADVFAFDT
ETDGLDTLTANLIGLSFAIEPGVAAYLPVAHDYLDAPVQLDRAYVLETLKPLLEDEKALK
VGQNLKFDKSLLARYDIDLRGIAYDTMLESYVLDSVSGRHDMDSLSDRYLDHKTITFEEI
AGKGKNQLTFNQIALEQAAPYAAEDADVTLQLHLAMWPKLKESTGQLKVFNEIEMPLLPV
LSHIERTGVLIDQHILAAHSKELSKRLGELEIQAHELAEEPFNLASTKQLQAILYEKQKL
PVLKKTPGGAPSTNEEVLAELALDYPLPKVILEYRGLAKLKTTYTDKLPLMINPVSGRVH
TSYHQAVTATGRLSSSDPNLQNIPVRNDEGRRIRQAFIAPAGYRIVAADYSQIELRIMAH
LSQDRGLLNAFAAGKDIHRATAGEVFGLPLDKVTNEQRRSAKAINFGLIYGMSAFGLARQ
LGIPRGEAQRYMDLYFERYPGVLEYMERTRQQASEQGYVSTLDGRRLYLPDVRSSNGMRR
KAAERAAINAPMQGTAADIIKRAMIAVDAWLQGQQQPLVRMIMQVHDELVFEVHESAMDD
ACLRIRSLMEGSMELAVPLKVDIGVGKNWDEAH
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattgatcctggtagacggttcctcttacctctatcgc
gcctatcacgccttcccgccgctgaccaactcggcaggtgaacctaccggggcgatgtac
ggtgtgctgaacatgttgcgcagcctgctgttgcagtaccagccgagccatgtggcggtg
gtttttgacgccaaaggcaaaaccttccgtgatgaactgtttgcagaatataagtcccac
cggcctccgatgcccgacgatttgcgtgcgcagatcgagccgctgcatcgcatggtgaag
gcgatggggctgccgctgctggttacgccgggcgttgaggccgatgacgttatcggcacg
ctggcgcaagaggcggaaaaggccggtcatgcggtattgatcagcaccggtgataaagac
atggcgcagttggtaacgccgaatatcaccctgataaataccatgaacaacaccatcctc
ggtccacaggaagtgtgtgacaagtacggcgtgccgccggagcttatcatcgattttctg
gcgctgatgggcgattcttcagataacattccgggcgtgcctggtgtcggtgagaagacc
gcacaggcgttgctgcaaggcttgggtggcctggatactctgtatggcaatcttgacggc
attgcggctctgagtttccgcggcgccaagaccatggcggccaagctggaacagaataaa
gaggtggcgtacctgtcttatcagctggccaccattaaaaccgacgtcgaactggagatc
acctgcgccgatcttaccgttgccgaacaagatgccgatcaactgcaacagctgttcaag
cattatgaattcaagcgctggctggcagacgtcgaagccggcacttggttgcagaacaaa
aagggtaacggtgccaaagtggccaatgggccaaaaccgtccagcgtgacggctgaaacc
cccaaagcggtggcggaagccaaactgtcgcaggaggggtatgtcaccattctggaagaa
agcacctttgtcgagtggcttgaacgtctgaaaaaggccgatgtttttgcctttgacacc
gaaaccgacgggctggatacgctaaccgccaatctgatcggcctgtcttttgccatcgaa
cctggggttgccgcctatttgccggtcgcgcatgactacctggatgcgccggtacagctg
gatcgcgcatacgtgctggaaacgctgaaaccgctgctggaagacgaaaaagccctgaag
gtgggccagaaccttaagtttgataaaagcctgctggcgcgttacgacattgacctgcgc
ggcattgcctatgacaccatgctggaatcgtatgtgctcgacagcgtcagcggccgccat
gatatggatagcctgtccgatcgctatctcgatcataaaaccatcacctttgaagaaatc
gccggcaaagggaaaaaccagctgacgttcaaccagattgccttggagcaggccgcacct
tatgcggcggaagacgccgacgtgacgctacagttacacctggcgatgtggccgaagcta
aaggaaagcactgggcagttgaaggtgttcaacgagatcgaaatgccactgctgcccgtg
ctgtcgcacattgagcgcaccggggtgttgatcgatcagcatattctggcggcgcactcc
aaagagctgagcaaacggcttggcgaactggaaattcaggcgcatgagctggccgaagag
ccgttcaatctggcgtccaccaagcagttgcaggcaattctgtatgaaaaacaaaagctg
ccggtattgaagaagacgccgggcggcgctccgtcgaccaacgaagaagtgttggcggag
ctggcactggactatccattgccaaaagtgatccttgaatatcgcggcttggcgaagctg
aaaaccacctacaccgacaagctgccgctgatgatcaatccggtcagcgggcgtgtgcat
acctcttatcatcaggcggtcacggcgaccggtcgcttgtcttccagcgatcctaacctg
caaaacattccggttcgcaatgatgaagggcggcgtattcgtcaggcgtttatcgcgccg
gctggttaccgtattgtggcggccgactactcgcagattgaattacgtatcatggcacac
ctgtcgcaagatcggggcctgcttaacgcgtttgccgccggcaaagacattcaccgcgcc
accgctggcgaagtctttggcctgccgctggacaaagtcaccaacgaacagcgtcgcagt
gccaaggcgatcaacttcggcctgatttacggcatgagcgcctttggtctggctcgtcag
ttggggatcccgcgtggtgaagcacagcgttatatggatctgtattttgaacgttatccg
ggcgtgctggaatatatggaacgtactcgccagcaggcgtcggagcaggggtatgtcagc
accctggatgggcgtcgtctgtatctgccagacgttcgctccagtaatggtatgcgtcgc
aaggcggcagagcgtgcggcaattaatgcgccgatgcagggcacggcggcggatattatc
aagcgggcaatgattgccgtcgatgcctggttacaaggccaacaacagccgctggtgcgc
atgatcatgcaggttcacgatgaattggtgtttgaggtgcatgagtcggcgatggacgac
gcctgcctgcgtatccgtagcttgatggaagggagcatggagttggcggtaccgttgaag
gtggatatcggtgtgggtaagaactgggatgaggcgcattga
DBGET
integrated database retrieval system
