Serratia odorifera: NCTC11214_01896
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Entry
NCTC11214_01896 CDS
T06612
Symbol
yhjK
Name
(GenBank) biofilm formation regulator HmsP
KO
K26149
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
NCTC11214_01896 (yhjK)
Enzymes [BR:
sof01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
NCTC11214_01896 (yhjK)
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GFIT
Motif
Pfam:
EAL
GAPES3
GGDEF
HAMP
Resolvase
Motif
Other DBs
NCBI-ProteinID:
VDZ55887
UniProt:
A0A447KPU3
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All DBs
Position
1:1732324..1734327
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AA seq
667 aa
AA seq
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MRVRRSLTIKQMATVSGVALVTICIFIVIQLFHFVQQRRDDYAQQLENIAHSVRQPLAEA
VLRMDVPETKRVLNSLLPVGILTRADIVLPNEFQALHANFPPERPIPSLIARIFDLPVQI
SVPLYSLERVPANPQPLAYLVLQADSFRMYQFILSTVSTMLSTYLLLALILSIAITWCMN
RLMVYPLRAMARELENISEEDAPYHQLMLPSLHQDDELGLLARNYNRNQQRLARAHADMS
RLSTRNSITGLPNQVLLTALLEQHIASSLRPERFNLLVIGIETLHEASGVLTPAQRETLV
RKLTEKLHQCLDKDSVLAQLTNAEFAVLAKGIERPFHAMQLAQRIMAQINAPLDIQKMSL
RPTASIGIAHYLDRGESAEQLLRSAMSAMMSAHRDGKNHILFFEPSLTDRTQKRLTQESE
ILQGIERDQFTLYLQPQMDMRTNAVIGAEALLRWRQYDGSITLPADVIPLAEELGVIVPL
GNWVLEASCRILADWQARGIALPLAVNVSALQMQDADFVPQLKLMLQRYAIDPRKLLLEI
TETVRIHDLDHALALLRELHELGLSIALDDFGMGYSSLNYLNRLKGLPIDLIKIDKSFIH
GLPGDEAMVRIVSAISEVLNLPVMAEGVETAAQRDWLLQHGMYHGQGFLFSHPLPREAFE
LQFAGKG
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
ttgcgggtcaggcgttcactcacgattaagcagatggcgacggtgtccggggtggcgctg
gtcacgatctgcatttttatcgtcattcagttattccactttgtgcagcagcgcagggat
gactacgcccagcagttggagaatatcgcccattcggtacgccaaccgttggcggaagcg
gtgctgcgcatggatgtgccggaaaccaaacgggtgctgaattcgctgttgccggtcggc
attttgacccgtgccgatatcgtgttgccgaacgagtttcaggcgctacacgccaatttc
ccgccggaacggccgataccgtcgctgattgcgcgcatttttgatttgccggtgcaaatt
tccgtgccgctgtattcgctggaacgggtgcccgccaatccgcagccgctggcctatctg
gtattacaggccgattcgttccgcatgtatcagttcattctcagtacggtgtcgaccatg
ctgtccacctatctgctgctggcgctgattttgtcgatcgccatcacctggtgcatgaac
cggctgatggtctatccgctgcgcgccatggccagggagctggaaaacatctccgaggag
gatgcgccgtatcatcaattgatgttgccgtcgctgcaccaggatgacgagcttggcctg
ctggcgcgcaactataaccgtaatcagcagcggctggcccgcgcccatgccgatatgagc
cgcctcagcacccgcaactcgattaccgggctgcccaatcaggtgctgttgacggcgttg
ctggagcagcatattgcctccagcctgcgaccggaacgtttcaatctgctggtaatcggc
attgaaacgctgcatgaggccagcggcgtactgacgccggcgcaacgtgaaacgctggtg
cgcaaattaacggaaaagctgcaccaatgtctcgacaaggacagcgtgctggcgcagttg
accaacgccgagtttgcggtgttggccaagggcattgaacggccgtttcacgccatgcag
ctggcgcagcgcatcatggcgcaaatcaacgcgccgctggatatccagaagatgtcgctg
cggccgaccgccagcattggcattgcgcattatctcgatcgcggcgaaagcgccgaacag
ctgctgcgcagcgcgatgtcagccatgatgtcggcgcaccgcgacggcaaaaaccacatt
ctcttcttcgaacccagcctgaccgaccggacgcaaaagcgcctgacgcaggaaagcgaa
attttgcaaggtatcgaacgggaccagtttaccctgtacctgcagccgcaaatggacatg
cgcaccaacgcggtgattggcgccgaagcgctgctgcgctggcggcagtacgacggcagt
attaccctgccggccgatgtgatcccgctggccgaagagctgggggtgatcgtgccgctt
ggcaactgggtgctggaagcctcgtgtcgcattctggccgactggcaggcgcggggcatt
gcgctgccgctggcggtcaacgtgtcggcgttgcaaatgcaggatgccgacttcgtgccg
cagctgaagctgatgctgcaacggtacgcgatcgatccgcgcaagctgctgttggaaatt
accgaaacggtgcgtattcacgatcttgatcatgcgttggcgttgctgcgggaactgcat
gaactcggcctgtcgattgcgctggatgattttggcatgggttactccagcctcaactat
ctcaatcgcctgaaaggcctgccgatcgatctgatcaagatcgacaaaagctttatccac
ggtctgccgggcgacgaggcgatggtgcgcatcgtcagcgcgatttccgaggtgctgaac
ctgccggtgatggccgaaggcgtggaaaccgccgcacagcgcgactggctgttgcagcac
ggcatgtatcacggccaggggttcctgttttcccatccgctgccacgcgaggcgtttgaa
ctgcagtttgccggcaaaggttga
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