Serratia odorifera: NCTC11214_01945
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Entry
NCTC11214_01945 CDS
T06612
Symbol
dapF
Name
(GenBank) Diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sof
Serratia odorifera
Pathway
sof00300
Lysine biosynthesis
sof00470
D-Amino acid metabolism
sof01100
Metabolic pathways
sof01110
Biosynthesis of secondary metabolites
sof01120
Microbial metabolism in diverse environments
sof01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NCTC11214_01945 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NCTC11214_01945 (dapF)
Enzymes [BR:
sof01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
NCTC11214_01945 (dapF)
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Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
VDZ56011
UniProt:
A0A447KQ19
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All DBs
Position
1:1774807..1775631
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMMVDAVTQNVYFSPELIRRLADRHLGIGFDQLLVVEPPYDPELDFHY
RIFNADGSEVAQCGNGARCFARFVRLKGLTNKRDIRVSTQTGRMVLSVTDDDLVCVNMGE
PNFDPQTVPFRAAKAEKTYIMRAAEHTVLAGVVSMGNPHCVLQVDDVKTAKVELLGPVLE
SHERFPERANIGFMQVVSRDRIKLRVYERGAGETQACGSGACAAVAVGIQQELLSEEVHV
ELPGGSLHIRWKGPGTPLFMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtctgggcaacgactttatgatggtcgatgccgtaaca
cagaatgtctatttctcacctgagctgatccgccggctggccgatcggcatttaggcatc
ggttttgaccagctactggtggtggaaccgccatacgatccggagctcgatttccactac
cgcatttttaatgccgacggcagtgaagtggcgcagtgcggcaacggtgcgcgctgtttt
gcccgcttcgtgcgtctcaaggggctgaccaacaaacgcgatattcgcgtcagcacccaa
accggccgcatggtattgagcgtgaccgacgacgatctggtgtgcgtcaacatgggcgaa
ccgaattttgatccccagacggtgccgtttcgcgccgccaaggcggaaaaaacctacatc
atgcgcgctgcggaacacacggtgttggccggcgtggtatcgatgggcaatccacattgt
gttttgcaggtagatgatgtaaaaaccgccaaagtagaattgcttggcccggtactggaa
agccacgaacgttttcctgagcgcgccaatatcggtttcatgcaggtggtcagtcgcgat
cgcatcaagctgcgcgtttacgagcgcggtgccggtgaaacgcaggcctgcggcagcggc
gcttgtgccgccgtggcagtagggattcaacaggaattgctgtcagaagaggtacatgta
gaactgccgggtggcagcctgcatatacgttggaaagggccgggtacgccgctgtttatg
accggtccggcaacccatgtttatgacggatttattcatttatga
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