Serratia odorifera: NCTC11214_02057
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Entry
NCTC11214_02057 CDS
T06612
Symbol
fadB_2
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
sof
Serratia odorifera
Pathway
sof00071
Fatty acid degradation
sof00280
Valine, leucine and isoleucine degradation
sof00310
Lysine degradation
sof00362
Benzoate degradation
sof00380
Tryptophan metabolism
sof00410
beta-Alanine metabolism
sof00640
Propanoate metabolism
sof00650
Butanoate metabolism
sof00907
Pinene, camphor and geraniol degradation
sof00930
Caprolactam degradation
sof01100
Metabolic pathways
sof01110
Biosynthesis of secondary metabolites
sof01120
Microbial metabolism in diverse environments
sof01200
Carbon metabolism
sof01212
Fatty acid metabolism
Module
sof_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
NCTC11214_02057 (fadB_2)
00650 Butanoate metabolism
NCTC11214_02057 (fadB_2)
09103 Lipid metabolism
00071 Fatty acid degradation
NCTC11214_02057 (fadB_2)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
NCTC11214_02057 (fadB_2)
00310 Lysine degradation
NCTC11214_02057 (fadB_2)
00380 Tryptophan metabolism
NCTC11214_02057 (fadB_2)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
NCTC11214_02057 (fadB_2)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
NCTC11214_02057 (fadB_2)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
NCTC11214_02057 (fadB_2)
00930 Caprolactam degradation
NCTC11214_02057 (fadB_2)
Enzymes [BR:
sof01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
NCTC11214_02057 (fadB_2)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
NCTC11214_02057 (fadB_2)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
NCTC11214_02057 (fadB_2)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
NCTC11214_02057 (fadB_2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
VDZ56353
UniProt:
A0A3S4DHP3
LinkDB
All DBs
Position
1:complement(1878516..1880645)
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AA seq
709 aa
AA seq
DB search
MLYQGETLQLHWLDNGIAELVFDAPGSVNKLDTRTVAALGEALAVLEKQTALKGLLLRSN
KAAFIVGADITEFLSLFAAPAEKLEQWLNFANAIFNRLEDLPVPTISAINGYALGGGCEC
VLATDFRVASPDARIGLPETRLGIMPGFGGSVRLPRLLGNDSALEIIAAGKDISAKDALK
VGLVDAVVAPEKLADAALKMLQQAIEGQLDWRAYRRPKLEPLKLSPIEAAMSFTTAKGMV
LQTAGKHYPAPMTAVKTIEAAARMGRNDALKLETASFVPLARSNEARALVGIFLNDQFVK
SQAKKLANKQEAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDINEKSLALGMSEAAKLL
NKQLERGKLDGMKMAGVLATIQPTLDYAGIERAQVIVEAVVENPKVKAAVLSEVEALIGE
QTVLASNTSTIPINELAKSLKRPQNFCGMHFFNPVHRMPLVEIIRGEHTSDSTIAAVVSY
ASRMGKTPIVVNDCPGFFVNRVLFPYFAGFSLLLRDGADFRTVDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQAVMAAGFPERMAKNYRDAVDVMFDNQRFGQKNQLGFYRYSQDSKGKP
RKDNDEQTDALLADVSQPRQNISGEEIIARMMIPMINEVVRCLEEGIIASPAEADMALVY
GIGFPPFHGGVFRYLDTLGSANYLDMAQRYAHLGALYEVPAGLRAKSRT
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaggcgaaaccttacaactgcactggctcgataacggcatcgccgagctg
gtgttcgatgcccccggttcagtcaacaaactggacacccgcaccgtggcggcgctgggc
gaagcgctcgcagtgctggaaaagcaaactgcgctgaagggtctgctgctgcgctccaat
aaagccgcatttattgtcggtgccgacatcaccgaatttctgtcactgtttgccgcaccg
gcagaaaagctcgaacaatggctgaattttgccaatgccatctttaaccgtctggaagat
ctgccggtaccgaccatttcggccatcaatggctatgcgctgggcggcggctgcgaatgc
gtgttggcaacggatttccgcgtggcgtcgccggatgcacgtatcggcctgccggaaacc
cggctgggcatcatgccgggcttcggcggctccgtgcgtctgccacgactgctgggtaat
gacagtgcgctggaaattattgccgccggtaaagacatcagcgccaaagacgcgctgaaa
gtcggcctggtggatgccgtcgtcgcgcctgaaaaactggcggacgcggcgctgaaaatg
ctgcaacaggcgatagaaggtcagctcgactggcgtgcctaccgccgacctaaacttgag
ccgttgaaattaagcccaatagaagccgcgatgagtttcaccacggccaagggcatggtg
ctgcaaactgccggcaaacattatcctgcgccaatgaccgcggtaaaaaccattgaagca
gcggccaggatggggcgcaacgacgcgttgaaactggaaactgccagttttgtgccattg
gcgcgctccaacgaggcacgtgcactggtcggcatcttcctgaacgatcagttcgttaaa
agccaggcgaaaaaactggccaataagcaggaagcgccaaagcaggcggcagtactgggt
gccggtatcatgggcggcggcattgcctaccagtccgcgctgaaaggcgtgccagtgatc
atgaaggacattaatgagaaatcattggcgctcggcatgagcgaagcggccaaactgctg
aacaaacagttggagcgcggcaagctggacggcatgaagatggccggcgtactggccacc
attcagccgacgctggactacgccgggatcgagcgggcgcaggtgattgtcgaagccgtg
gtagaaaacccgaaggtcaaggctgccgtactgtcagaagtagaagccctgattggtgaa
cagaccgtgctggcctccaatacctcgaccattccgattaacgaattggccaaatcgctc
aagcgaccgcagaacttctgcggcatgcacttctttaatccggtgcatcgcatgccattg
gtcgaaatcattcgcggcgagcacactagcgacagcaccatcgctgcggtggtgtcttac
gcttcacgcatgggaaaaacgccgattgtcgtcaacgattgtccagggttctttgttaac
cgtgtgctgttcccctactttgccggcttcagcctgctgctgcgtgacggcgcggacttc
cgcacggttgataaagtaatggagaaacagttcggttggccaatgggcccggcgtatctg
cttgacgtggtgggcattgataccgcgcaccacgcccaggcggtgatggccgccgggttc
ccggaacgtatggcaaaaaactaccgcgacgcggtggacgtcatgttcgacaaccagcgt
ttcggccagaaaaaccagttgggtttctaccgctacagtcaggacagcaaaggcaagcca
cgcaaagacaacgacgagcaaacggatgcactgctggctgacgtcagccaaccacgccag
aacatcagtggcgaagaaatcattgcccgcatgatgatcccgatgatcaacgaagtagtg
cgctgccttgaggaaggcattatcgccagcccggccgaagcggatatggcgctggtatac
ggcatcggcttcccgccgttccacggcggcgttttccgctacctggataccctgggcagc
gccaattacctggacatggcacagcgttacgcgcatctgggcgcactgtatgaagttccg
gccggcttgcgcgccaaaagccgaacgtaa
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