Serratia odorifera: NCTC11214_02220
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Entry
NCTC11214_02220 CDS
T06612
Symbol
dnaB_3
Name
(GenBank) Replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
sof
Serratia odorifera
Pathway
sof03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11214_02220 (dnaB_3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_02220 (dnaB_3)
Enzymes [BR:
sof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
NCTC11214_02220 (dnaB_3)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
NCTC11214_02220 (dnaB_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
divDNAB
ATPase
AAA_33
nSTAND3
CbiA
Motif
Other DBs
NCBI-ProteinID:
VDZ56777
UniProt:
A0A3S4DI71
LinkDB
All DBs
Position
1:2022594..2024009
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AA seq
471 aa
AA seq
DB search
MAGKKPTNKSNEAQAPRDRQMEGLKMPPHSLEAEQSVLGGLMLDNERWDNVAERVVANDF
FSRPHRLIFTEMQRLLEMSKPIDLITLSESLEQKGELDSVGGFAYLAELSKNTPSAANIS
AYADIVRERAVVREMISVANEIADAGYDPQGRSSEDLLDLAESRVFQIAENRANKDEGPK
SIDQILEATVSRIESLYQTPHDGVTGVDTGYQDLNKKTAGLQKSDLIIVAARPSMGKTTF
AMNLCENAAMLQEKPVLIFSLEMPGEQIMMRMLASLSRVDQTRIRTGQLDDEDWARISST
MGILLEKRNMYIDDSSGLTPTEVRSRARRIFREHNGLSLIMIDYLQLMRVPALSDNRTLE
IAEISRSLKALAKELQVPVVALSQLNRSLEQRADKRPVNSDLRESGSIEQDADLIMFIYR
DEVYHENSDLKGVAEIILGKQRNGPIGTVRLTFNGQWSRFDNYAGPQYDDE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggcaggaaagaaacccaccaacaaatctaacgaagctcaggcaccgcgcgatcgccag
atggaagggctgaaaatgccgccgcattcgctggaggcggagcagtccgtgttgggcggt
ttaatgctggataacgagcgctgggacaacgtggcggaacgcgtggtcgccaatgatttc
tttagccgtccgcaccgcctgatctttaccgagatgcagcgcctgctggaaatgagtaaa
ccgatcgacctgatcaccctgtccgaatcgttggagcagaagggtgagctggactccgtc
ggcggttttgcctatctggccgaactgtccaaaaatacccctagcgccgccaacatcagc
gcctatgccgatatcgtgcgtgagcgcgcggtggtgcgtgaaatgatctcggtagcgaac
gagatcgccgacgccggttacgatccgcaagggcgtagcagcgaggatctgctcgatctg
gcggaatcacgggtgttccagattgcagaaaaccgagccaataaagacgaagggccaaaa
agcatcgaccagatccttgaagccaccgtttcgcgcatcgaatcgttgtaccaaacgccg
catgacggcgtgaccggcgtggataccggctatcaggatctgaacaagaaaaccgcgggt
ctgcaaaagtcggatctgatcatcgtggcggcgcgtccgtcgatgggcaaaaccaccttt
gccatgaacctgtgtgaaaacgccgcgatgctgcaagaaaaaccggtgttgatcttcagc
ctcgaaatgcccggcgaacagatcatgatgcgtatgctggcttcgctatcacgcgttgac
cagacgcgtatccgtaccggtcagctcgatgacgaggattgggcgcgtatttccagcacc
atgggcattctgctggaaaagcgcaacatgtacatcgacgactcctcgggtctgacgcca
accgaagtgcgttcgcgcgcgcgccgcatcttccgcgagcataacggccttagcctgatc
atgatcgactacctgcaattgatgcgcgtgcctgcgctatccgataaccgtacgctggaa
atcgccgaaatttcacgctcgctgaaggcattggcgaaagaactgcaggtgccggtagtg
gcgctgtcgcagttgaaccgctcactggaacagcgcgccgacaaacgcccggtcaactcc
gacctgcgtgagtctggctcgattgagcaggatgccgacttgatcatgtttatctatcgt
gacgaggtctatcacgagaacagcgacctgaagggcgtggcggaaatcattctcggcaag
cagcgtaacggcccgatcggtacggtacgcttgacctttaacggccaatggtcgcgtttc
gacaattacgccggcccgcaatatgatgacgaataa
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