Serratia odorifera: NCTC11214_02382
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Entry
NCTC11214_02382 CDS
T06612
Symbol
rpoD_2
Name
(GenBank) Sigma-70
KO
K03086
RNA polymerase primary sigma factor
Organism
sof
Serratia odorifera
Pathway
sof02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NCTC11214_02382 (rpoD_2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sof03021
]
NCTC11214_02382 (rpoD_2)
Transcription machinery [BR:
sof03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NCTC11214_02382 (rpoD_2)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r1_1
Sigma70_r1_2
Sigma70_ner
SPT6_acidic
Motif
Other DBs
NCBI-ProteinID:
VDZ57286
UniProt:
A0A447KRA7
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All DBs
Position
1:complement(2176716..2177396)
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AA seq
226 aa
AA seq
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MEQNPQSQLKLLVTRGKEQGYLTYAEVNDHLPEDIVDSDQIEDIIQMINDMGIQVMEEAP
DAMTCCLLKTRTAPTKTQKKPPLRYCPALSPRLGRTTDPVRMYMREMGTVELLTREGEID
IAKRIEDGINQVQCSVAEYPEAITYLLEQYDRVEAGESRLSDLITGFVDPNAEEDIAPTA
THIGSELSDRRAKRRRRRRRRRRRRRRQQHRSGTGAPEIHRVARAV
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaaacccgcagtcacagctgaagctacttgtcacccgtggtaaggagcaaggc
tatctgacctatgctgaggtcaatgaccatctgccggaagatatcgtcgactccgaccag
atcgaagacatcatccagatgattaatgacatgggcatccaggtgatggaagaagcaccg
gacgcgatgacctgttgcttgctgaaaactcgaacagcaccgacgaagacgcagaagaag
ccgccgctcaggtactgtccagcgttgagtccgagattgggccgcaccactgacccggtt
cgcatgtacatgcgtgaaatgggtaccgttgaactgctgacgcgcgaaggcgaaatcgac
attgccaaacgcattgaagacggtatcaatcaggtgcagtgctcggtcgccgaatacccg
gaagccattacctatctgctggagcagtacgatcgcgttgaagcgggcgaatctcgcctg
tccgatctgatcaccggctttgtcgatccgaacgcggaagaggacatcgctcctaccgcg
acgcacatcggttctgagctgtcggaccgaagagcaaagcgacgacgaagaagaagacga
cgacgacgacgccgaagacgacaacagcatcgatccggaactggcgcgccagaaattcac
cgagttgcgcgagcagtatga
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