Serratia odorifera: NCTC11214_02756
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Entry
NCTC11214_02756 CDS
T06612
Symbol
fimD_3
Name
(GenBank) Outer membrane usher protein fimD precursor
KO
K07354
outer membrane usher protein
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
sof02035
]
NCTC11214_02756 (fimD_3)
Bacterial motility proteins [BR:
sof02035
]
Pilus system
Fimbrial proteins
NCTC11214_02756 (fimD_3)
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Motif
Pfam:
Usher
PapC_N
PapC_C
Motif
Other DBs
NCBI-ProteinID:
VDZ58359
UniProt:
A0A3S4EB25
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All DBs
Position
1:complement(2532064..2534709)
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AA seq
881 aa
AA seq
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MRSFAVSKCAQRLRQCCLPHCTWSYFSPALFMVAMLPSASVSAEIFFNPSFLSGDPTAIA
DLSRFEKDEGQAAGQYHVELYLNDDYVATRNINFVPVDKDAPAHDDSGLLPCLSYNQLSA
LNVNMTMQSKLTVLKPEQCLPLPEVIEGAQSEFDFEKQRLKISIPQVMLVNNVRGYIPPD
QWDNGITAALLTYNFSGGNSWGASTNNSYFLNLNSGFNWGAWRLRDNSSWSYSSGAGQHA
NQWQHINTYLQRAIIPLKGELTLGDHISPNDVFDSVNFRGVQLASDDNMLPDSLRGFAPT
VHGVAKSHAKVTINQNGYVIYQTYVPPGAFAISDLYPTSSSGDLKVEVQESDGSISRFTV
PYSAVPVLQREGRVKYAATAGQYRSGDGNKGKPGFAQGTLIWGLPAGVTLYGGSQLSNDY
AAFAFGAGKNLGSWGAMSADVTQANSRLADDSRHQGQSLRFLYAKSLNEAGTNFQLLGYR
YSTEGFYTLDDTSYRRMSGYSLNTQDGPVDVKPTANQYYNLKYSKKGRVQVNITQQVWDY
GSLFLTGSRQTYWHTDEKNDLLQAGYSAYWNDISYSLSYSHNKSPGLAEADKRVALNLSL
PLGKWLSGGGAASDITRSSSTAYATYAANTDTHGQLAQQAGVSGSLLAGKNLTYGVMQGY
SNRGGGGNGSANLNYQGTYGNSNLSYSYSSGYRQVNYGLSGGITAHANGVTLSQPLSDTN
VLVAAAGAKAVAVENATGVSTDWRGYAVMPYATTYRLNRVALDPTTLQDNADLDDAVVNV
IPTKGALVRAEFAARIGARALMMLQQRNGKAVPFGATVAQENGSGASIVGENGQVYLSGL
PLSGKLQVAWGHGAAERCEVSYQLPQGSEHQAINYAKAGCQ
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atgcggtcatttgctgttagcaagtgcgcacagcgattaagacagtgctgcctgccccat
tgcacctggtcttatttcagcccggcgctatttatggttgcaatgctgccatcagcctct
gtcagcgcggagatattctttaacccgtcgttcctgtcaggcgatcctacggctatcgcc
gatttgtcgcgtttcgaaaaagacgaggggcaggccgccgggcaatatcacgttgagctt
tatcttaacgacgattacgttgccacccgtaatatcaactttgtccccgtagacaaagac
gcgccggcacatgatgacagcggcctgctgccctgcctgtcatataatcagctcagcgcg
ctgaacgttaatatgaccatgcaaagcaaattgaccgtattaaagcccgaacaatgcctg
ccgctgccagaggtcattgagggtgcgcagtccgagttcgattttgaaaagcaacggctg
aagatcagcattccacaggtgatgctggtgaataacgtgcgtggttacatcccgcccgac
cagtgggataacggcatcaccgccgcgctgctgacctataatttcagcggtggtaacagc
tggggagccagcaccaacaatagctattttcttaacctcaatagcggcttcaactggggc
gcgtggcggctgcgcgataattccagctggtcatacagcagcggcgccggccagcatgcc
aaccagtggcagcacatcaacacctacctgcaacgggccatcattccgctcaagggcgag
ctgacgctgggcgatcacatcagccccaacgacgtgtttgacagcgtcaattttcgcggc
gtgcagcttgcctccgacgataatatgctgccggacagcctgcgcggatttgccccgacg
gtgcacggcgtggccaagagccatgccaaggtgaccatcaaccagaacggctatgtcatt
taccagacctacgttccccccggggcctttgccattagcgatctctaccccacgtcgtcc
agcggcgacctgaaggtcgaggtgcaggagagcgacggcagcatcagccgctttaccgtg
ccctattccgccgtgccggttttgcaacgcgaggggcgggtaaagtatgccgccaccgcc
gggcagtaccgcagcggcgacggcaataaaggcaaaccggggtttgcccagggtacgctg
atctgggggctgccggctggcgtcacgctgtacggcggcagccagctgtcgaacgactat
gccgcctttgcctttggcgccggcaagaatctgggcagttggggcgcaatgtcggcggac
gttacccaggccaacagccgcctggcggacgacagccgtcaccaggggcagtcgctgcgc
ttcctttatgccaagtcgctgaacgaggcgggaaccaacttccagttgctgggttaccgc
tattcgaccgaaggcttctacacgctggatgacaccagttatcgccgtatgagtggctat
tcgctcaacacccaggatggcccggtcgacgtcaagccgacggccaatcagtattacaac
ctcaaatactccaaaaaggggcgggtgcaggtcaatatcacccagcaggtctgggactat
ggctcactgttcctgaccggcagccgacaaacctattggcacaccgacgagaaaaacgat
ctgctgcaagccggctacagcgcctattggaacgacatcagctatagcctttcctacagc
cataacaaaagtccggggctggcagaggccgacaagcgcgtggcgctcaacctttcgctg
ccgcttggcaagtggctgtcgggcggcggcgcggccagcgatatcacccgctcctccagc
accgcttatgccacctatgcggccaacaccgacacccacgggcaactggcccagcaggcc
ggcgttagcggtagcctgctggcgggcaaaaacctgacctacggcgtcatgcaggggtac
agcaaccgcgggggcggcggcaacggcagcgccaacctgaactaccagggaacttacggc
aacagcaacctcagctacagctacagcagcggctaccggcaggtgaactatggcctgagc
ggcgggattaccgctcacgccaacggcgtcacccttagccagccgctcagcgataccaac
gtgctggtggccgccgccggcgccaaagcggtagcggttgaaaatgccaccggcgtcagc
accgactggcgcggctatgcggtgatgccctacgccaccacctatcgcctgaaccgggtg
gcgcttgacccgaccaccctgcaagacaatgccgatctggacgatgcggtggtgaacgtt
ataccgaccaaaggcgcactggtacgcgccgagtttgcggcacgcattggcgccagagcc
ttgatgatgctgcagcagcgcaatggtaaggcggtgccgtttggcgccaccgtggcgcag
gaaaacggcagcggtgccagcatcgtcggcgaaaacggccaggtgtatctgtctggcctg
ccgctaagcggcaagttgcaggtggcgtggggccacggtgcggcggagcgttgtgaagtg
tcttaccagttgccacagggcagcgaacaccaggcaataaactatgccaaggcggggtgc
cagtga
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