Serratia odorifera: NCTC11214_02868
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Entry
NCTC11214_02868 CDS
T06612
Symbol
dnaE_1
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sof
Serratia odorifera
Pathway
sof03030
DNA replication
sof03430
Mismatch repair
sof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11214_02868 (dnaE_1)
03430 Mismatch repair
NCTC11214_02868 (dnaE_1)
03440 Homologous recombination
NCTC11214_02868 (dnaE_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_02868 (dnaE_1)
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_02868 (dnaE_1)
Enzymes [BR:
sof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11214_02868 (dnaE_1)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11214_02868 (dnaE_1)
DNA repair and recombination proteins [BR:
sof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11214_02868 (dnaE_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
Motif
Other DBs
NCBI-ProteinID:
VDZ58729
UniProt:
A0A447KSS3
LinkDB
All DBs
Position
1:2632568..2634841
Genome browser
AA seq
757 aa
AA seq
DB search
MTFTHFWYQDMAEPRFIHLRVHSDYSMIDGLAKVGPLVKRAAALAMPALAITDFTNLCGL
VKFYGSAHGAGIKPIIGADFHVQSDVLGDELAQLTVLAANNDGYQNLTLLISRAYQRGYG
AAGPIIDRDWLVEHREGLILLSGGRMGDVGKFLLRGNHAQVEQCLAFYQQYFPDNYYLEL
IRTGRPDEENYLHAAVALATERDLPVVATNDVRFLVEDDFDAHEIRVAIHDGFTLDDPKR
PRNYSPQQYMRNEDEMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGDMTTED
FLVAKSKEGLEERLEFLFPDPEVRAQRRPEYDERLDIELKVINQMGFPGYFLIVMEFIQW
SKDNNVPVGPGRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEK
RDLVIEHVAEMYGREAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMT
LEKAFAAEPQLPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYC
DAEGNHPVTQFDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINKRRAKTDLPPIDIAAIP
LDDKKSFDMLQRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDN
FIDRKHGREEISYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRR
AMGKKNPVEMAKQRGGFEDGAKARALTVNCRSRSSIW
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgacattcacacatttctggtatcaggatatggccgaaccccgttttattcacttacgc
gttcacagcgactactcgatgatcgacgggctcgccaaagtcgggccgttggtgaaaaga
gccgctgcgttagccatgccggccctggcaatcaccgacttcaccaacctgtgcggtctg
gtcaagttttatggcagcgcgcacggcgccggtatcaaaccgatcattggcgcagatttc
catgtgcaaagcgatgtgctgggcgatgagctggcgcagcttaccgtactggccgccaac
aacgacggctatcagaacctgaccttgctgatctcccgcgcctatcaacgcggttacggc
gccgccggtcctatcatcgaccgtgactggctggtagaacaccgcgaagggctgatattg
ctatccggcgggcggatgggcgacgtcggcaaatttctgctgcgcggcaaccacgcgcag
gttgagcagtgtctggcgttctatcagcagtatttccccgacaactactacctggagctg
atccgcaccgggcggccggatgaagaaaactacctgcacgccgcggtagccctggcgacc
gagcgtgatttaccggtggtggcgaccaacgatgtgcgttttctggttgaagacgatttc
gacgcccatgaaatccgcgtggcgatccacgacggcttcacccttgatgaccctaaacgt
ccgcgcaattacagcccgcagcaatacatgcgcaatgaagacgagatgtgcgagctgttt
gccgatattcccgaagcgttgatcaacagcgttgaaatcgccaaacgctgtaacgtcacc
attcgtctgggtgaatacttcctgccgcaattcccaaccggtgatatgactaccgaagac
tttttggtagccaaatccaaagaagggctggaagaacgtctggagttcctgttccccgat
cctgaagtccgtgcccaacgtcggccagaatacgatgagcgtctggatatcgaactgaag
gtgatcaaccagatggggttccccggttacttcctgatcgtaatggagttcatccagtgg
tcgaaggataacaacgtgccggtagggccagggcgaggctccggcgccggctcgctggtg
gcctatgcgttgaagatcaccgacctcgacccgctggaattcgatctgctgttcgaacgt
ttccttaaccctgaacgtgtttcgatgcctgacttcgacgtcgatttctgcatggaaaaa
cgcgatctggtgattgagcacgtggcggagatgtacggtcgcgaagcggtatcacagatt
attaccttcggcaccatggcggccaaagcggtaattcgcgacgttggccgcgtgctgggc
catccatacgggtttgtcgaccgcatttcaaaactggtgccgcccgatccgggcatgacg
ctggaaaaggcctttgccgccgaaccgcagttgccggaaatctacgaagcggacgaagag
gtcaaggcgctgatcgacatggcgcgcaaactggaaggggtgacgcgtaacgccgggaag
cacgccggcggcgtggtgatcgcgccgaccaagatcaccgattttgctccgctgtattgc
gacgcggaaggcaaccatccggttacccagttcgataaaaacgacgtggaatacgccggg
ctggtgaagttcgacttccttggcctgcgtaccctgaccatcatcgactgggcgctggag
atgatcaacaagcggcgcgccaagaccgacctgccgccgatcgacatcgccgctatcccg
ctcgacgacaagaaaagcttcgatatgctgcaacgctcggaaaccactgcggtattccag
cttgaatcgcgcggcatgaaggatctgatcaagcgtctgaaaccggactgcttcgaagac
atgatcgctctggtggcgctgttccgtccggggccgttgcaatctggcatggtggataac
tttatcgaccgtaagcacggccgtgaagagatctcctacccggacattcaatggcagcat
gagtcgctgaaaccggtactggagccaacctacggcatcatcctgtatcaggaacaggtg
atgcagattgcccaggtgctggctggctatacgctgggcggcgcggatatgctgcgtcgt
gcgatgggtaaaaagaacccggtcgaaatggccaagcagcgtggcggttttgaagatggg
gcgaaagcgcgggcattgacggtgaactgtcgatcaagatcttcgatctggtag
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