Serratia odorifera: NCTC11214_03061
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Entry
NCTC11214_03061 CDS
T06612
Symbol
xynB
Name
(GenBank) Beta-xylosidase
KO
K01198
xylan 1,4-beta-xylosidase [EC:
3.2.1.37
]
Organism
sof
Serratia odorifera
Pathway
sof00520
Amino sugar and nucleotide sugar metabolism
sof01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
NCTC11214_03061 (xynB)
Enzymes [BR:
sof01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.37 xylan 1,4-beta-xylosidase
NCTC11214_03061 (xynB)
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Motif
Pfam:
Glyco_hydro_43
GH43_C2
DUF1349
Motif
Other DBs
NCBI-ProteinID:
VDZ59395
UniProt:
A0A3S4DKA5
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All DBs
Position
1:2808684..2810363
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AA seq
559 aa
AA seq
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MSIIQNPILPGFNADPSIIRVEDTYYIANSTFEWFPGVRLHESKDLEHWNLLPSPLSTTA
LLDMKGNPSSGGIWAPALSYADGKFWLVYTDVKITEGAFKDMTNYLTTATDIRGPWTDPI
KLNGVGFDASLFHDDDGGKYLVQQTWDHREYHHPFNGITLTELDPKTLKLKPETARTIYR
GTAVALVEGPHLYKLNGYYYLFAAQGGTVFTHQEVVARSKTLDANSFETAPGEVFLTNVD
TPDSYIQKQGHGSLVSTPNGEWYYVSLCARPWNHAGESVYDPRGWSTLGRETSIQKVIWD
ADDWPRIVGGHGGKTFVEGPKDAIYTQSAEDHSQRDEFTSSTLDLNWNTLRVPFNEKMGT
TGDGKLTLIGQGSLANTHDLSLIARRWQAFYFDAQVKVKFNPFNYQQMAGLTNYYNDRHW
SFVFITWNEINGSVIEVGENNRGKYTSYLKDQAINIPDGTEYVWFRTRVRKESYCYEYSF
DGVSFTEIPVKLDAAILSDDYVLQSYGGFFTGAFVGLAVVDYSGYAASAEFYSFDYQELG
DSLTANDGYSWEAGESRFN
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgtcaatcattcaaaatcctatattgcctggattcaatgcagaccccagtattatccgt
gtagaggatacttactatatcgcaaactcgacatttgagtggttcccaggcgttcgtttg
catgagtcaaaagacctggaacactggaatcttcttcctagtccattgtcgaccactgct
cttttagatatgaagggcaatccttcatcaggggggatttgggctccagcgctctcctat
gccgatggcaaattctggttggtttataccgatgtgaaaatcaccgaaggtgcctttaaa
gacatgacgaactacctgaccaccgcaacggatattcgtggcccatggaccgatcctatc
aaacttaatggcgtcggttttgatgcttcactgttccatgacgatgatggcggtaaatac
ttggttcaacaaacctgggaccatcgagagtaccatcacccgtttaatggcattacatta
accgagcttgatccaaagacactgaagttaaaaccagaaaccgcgcgtaccatttatcgc
ggcactgccgttgcgctggttgaggggccacatctctacaaactaaacgggtattactat
ctttttgccgctcagggaggaaccgtatttacccaccaggaggtggttgctcgttccaaa
accctggacgccaacagttttgaaaccgcgccaggagaggttttcctgaccaacgtagat
acccctgacagttacatccaaaaacaggggcatggcagtctggtgtcaaccccgaatggg
gaatggtattacgtctcactctgtgcgcgtccctggaatcatgctggtgagtctgtctac
gatcctcgtggttggtcaacgcttggcagagaaacctcgatccaaaaagttatatgggat
gcagacgactggccacgcattgtcgggggccacggtggaaaaacctttgtcgaagggcca
aaggacgctatttatacccaaagtgcggaagatcatagtcagcgggatgagtttacctcg
tcaacgctcgatcttaactggaatacacttcgtgtcccgttcaacgaaaaaatggggaca
acgggtgatggtaaattgacgcttataggtcaaggttctttagcgaatactcatgacctt
tcgcttattgcccggcgttggcaagccttttattttgatgcgcaagtcaaagtgaaattc
aatccgtttaattaccagcaaatggcgggcttaaccaattattataacgatcgccactgg
agctttgttttcattacctggaatgaaattaatggttcggtgatcgaagtaggcgagaat
aatcgtgggaaatacacctcctacctgaaagatcaggcaatcaatataccagatggtacc
gaatatgtctggttccgcaccagggttagaaaggaaagctattgttatgaatatagcttt
gatggggtgagcttcactgaaatccctgtcaaattggatgccgcaattctttcagatgat
tatgtactacaaagttacggtgggttctttaccggggcattcgttggcctggcggtagtc
gactactctggttatgccgccagtgcagaattttatagtttcgattatcaggaactgggt
gactcgttaacggccaatgacggctatagctgggaagcaggcgaatcgagatttaattaa
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