Serratia odorifera: NCTC11214_03336
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Entry
NCTC11214_03336 CDS
T06612
Symbol
truA
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sof03016
]
NCTC11214_03336 (truA)
Enzymes [BR:
sof01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NCTC11214_03336 (truA)
Transfer RNA biogenesis [BR:
sof03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NCTC11214_03336 (truA)
Prokaryotic type
NCTC11214_03336 (truA)
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
Motif
Other DBs
NCBI-ProteinID:
VDZ60211
UniProt:
A0A447KUF4
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All DBs
Position
1:3054237..3054950
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AA seq
237 aa
AA seq
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MQGCLEQALSKVADAPVVVFCAGRTDAGVHATGQVVHFETTARRKDAAWTMGVNTHLPPD
IAVRWVSEVREDFHARFSATARRYRYLIFNHRYRPAVLQQGMTHFYHPLDADRMQRAAQA
LLGENDFTSFRAVQCQSRTPWRNVKHVKVTRHGQYIVVDIKANAFVHHMVRNIVGSLMEI
GCGNQDENWMAELLALKDRNLAAATAKADGLYLVAVDYPEHFGLPHAPMGPLFLADD
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtgcaaggctgtctggaacaggcattgagcaaggtggccgacgcgccagtcgttgtgttt
tgcgccggccgaaccgacgccggggtacatgctactggccaggtggtgcactttgaaacc
accgcccggcgcaaggacgccgcctggaccatgggggtcaatacccatttgccaccggac
attgcggtacgctgggtgagcgaagtacgcgaggatttccacgcgcgtttcagcgccacg
gctcgccgctatcgctacctgattttcaaccatcgctaccgtccggcggtgttgcagcag
gggatgacgcatttctaccatccgctggatgccgatcgcatgcagcgcgcggcgcaggcc
ctgctgggtgaaaacgatttcacgtcgttccgcgcggtacagtgtcagtcgcgcacgccg
tggcggaatgtaaaacacgttaaggtcacgcgccacgggcaatatatcgtggtagatatt
aaggcgaatgcctttgtgcatcatatggttcgcaacattgtcggcagcctgatggaaatc
ggctgcggcaatcaggatgaaaactggatggccgaactgctggcgctgaaggatcgtaac
ctggcggcggcaacggcaaaggcggacggcctgtatctggttgccgtggattatcccgag
catttcggtttaccacacgcaccgatgggcccgctgtttttggccgatgactga
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