Serratia odorifera: NCTC11214_03403
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Entry
NCTC11214_03403 CDS
T06612
Symbol
menD
Name
(GenBank) 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase
KO
K02551
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase [EC:
2.2.1.9
]
Organism
sof
Serratia odorifera
Pathway
sof00130
Ubiquinone and other terpenoid-quinone biosynthesis
sof01100
Metabolic pathways
sof01110
Biosynthesis of secondary metabolites
sof01240
Biosynthesis of cofactors
Module
sof_M00116
Menaquinone biosynthesis, chorismate (+ polyprenyl-PP) => menaquinol
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
NCTC11214_03403 (menD)
Enzymes [BR:
sof01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.9 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase
NCTC11214_03403 (menD)
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Motif
Pfam:
TPP_enzyme_M_2
TPP_enzyme_N
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
VDZ60416
UniProt:
A0A3S5D7N5
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Position
1:3119728..3121401
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AA seq
557 aa
AA seq
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MSTSVFNRRWAALLLEALARHGVRHVCIAPGSRSTPLTLAAAANKSFICHTHFDERGLGH
LALGLAKATGEPVAAIVTSGTAAANLYPALIEAGLTGERLVFLTADRPPELIDCGANQAI
RQNGLYASHPAQSIELPRPTPDIPASWLVSTVDSAMAQLLHGALHINCPFAEPLYGGDQR
QYADWSDALGEWWHDSHPWLRQRDLHQPQKQPDWFFWRQKRGVVVAGRMSAEEGLQLAEW
AGMLGWPLIGDVLSQTGQPLPCADLWLAQPQAQHLLDNAQLVIQFGSSLTGKRLLQWQEQ
CRPEEYWLIDDLPGRRDPAHHRGRRIRARVGEWLDLHPAQPRSPWAGELAALADDALDAA
AGYLVNRFGEAQVAHRLPELLAENGLLFLGNSLIVRLVDALSQLPPGYPVFGNRGASGID
GLIATAAGVQRATAKPMLAIVGDLSALYDLNSLALLRQCSAPTVLIVVNNNGGQIFSLLP
TPEAERNRYYCMPQNLEFSHAAAMFQLNYALAENWGQLQQAVEQGWRHSGATLIELQVPP
ADGAETLQQLVQQMAAC
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacaagtgtttttaatcgccgctgggcggcgttgttgttggaagcgctggctcgc
cacggggtgcggcacgtctgtatcgccccgggatcgcgctcaacgccgttgacgctggcg
gcggccgccaataagtcttttatttgccacacgcattttgatgaacgcgggctgggccat
ttggcgctcggcctggcaaaagccaccggtgagccggtggcggcaatcgtcacttcgggt
accgcggcggccaacctttatcctgcgctgatagaagccgggttgaccggcgaacggctg
gtatttttgaccgccgatcgtccacccgaactgatcgactgcggtgccaatcaggcgatc
cgacaaaacggtttgtatgccagccatccggcgcagagcatcgagctgccgcgtccgacg
ccggatattcccgccagttggctggtttccaccgtcgacagtgccatggcgcagttgctg
catggcgcgttgcacatcaactgtccgtttgccgagccgctgtacggcggtgaccagcgg
caatatgccgactggtcggatgcgctgggcgaatggtggcatgacagccacccgtggctg
cgccaacgtgatctgcatcaaccacaaaagcagccagactggttcttctggcggcagaaa
cgcggtgtggtggtggccgggcgcatgagcgctgaagaggggctgcaactggcagaatgg
gccggcatgctgggctggccgttgatcggcgacgtattgtctcagaccggccaaccgctg
ccgtgcgccgacctgtggttggcacagccgcaggcgcagcatctgttggacaacgcccaa
ctggtgattcagtttggcagcagcctgaccggcaaacgcctgttgcagtggcaagagcag
tgccggccggaggagtactggctgattgacgatttgcccggccgacgcgacccggcacat
caccgcggccgtcgcattcgtgccagggtaggcgaatggctggatctgcacccggcacag
ccgcgctcgccatgggccggagagctggcggcgctggcagacgacgcgctcgatgcagcc
gccggctatctggtgaaccggttcggagaggcgcaggtagcacaccgcctgccggaactg
ctggcggaaaacggcctgctatttctcggcaatagcctgattgtacggctggtcgacgcg
ctgagccagttgccgcccggttatccggtgttcggcaatcgcggcgccagcggcattgat
gggctgattgctaccgccgccggcgtccagcgcgctaccgccaaaccgatgctggctatc
gtcggcgatctgtcggcgctgtacgatctgaattcgctggcgctgttgcgccagtgttcg
gcgccgacggtgctgatcgtggtgaataataacggcgggcaaatcttctcgctgttgccg
acgccggaagccgaacgcaaccgctattactgtatgccgcagaatctggagttcagccat
gcggcggcgatgttccagctcaattatgcgctggcggaaaactggggtcagctgcaacag
gcggtcgagcaaggctggcgccacagcggggctactctgattgaattgcaggtgccgccg
gccgacggcgcggaaacgttgcaacagctggttcagcaaatggcggcgtgctga
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