Serratia odorifera: NCTC11214_03418
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Entry
NCTC11214_03418 CDS
T06612
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_03418 (gyrA)
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_03418 (gyrA)
Enzymes [BR:
sof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
NCTC11214_03418 (gyrA)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11214_03418 (gyrA)
DNA repair and recombination proteins [BR:
sof03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC11214_03418 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Beta-prop_ELP1_1st
ApbA
Motif
Other DBs
NCBI-ProteinID:
VDZ60461
UniProt:
A0A447KUK8
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All DBs
Position
1:3135862..3138504
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AA seq
880 aa
AA seq
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MSDLAREITPVNIEDELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWN
KPYKKSARVVGDVIGKYHPHGDSAVYDTIVRLAQPFSLRYMLVDGQGNFGSVDGDSAAAM
RYTEVRMSKIAHELLADLEKETVDFVPNYDGTEQIPAVMPTKIPNLLVNGSSGIAVGMAT
NIPPHNLSEVISGCLAYIDDENISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKV
YIRARAEVEVDAKTGRETIIVHEIPYQVNKARLIEKIAELVKEKRVEGISALRDESDKDG
MRIVVEVKRDAVGEVVLNNLYSLTQLQVTFGINMVALHQGQPKLLNLKDILQAFVRHRRE
VVTRRTIFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKVALVAQPWDLGNV
GAMLERAGDDAARPEWLEPEFGIRDGKYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKE
LLNFIAELIFILQSPDRLMEVIREELEAVRDQFGDQRRTEITANSSDINIEDLINQEDVV
VTLSHQGYVKYQPLSDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLY
WMKVYQLPEASRGARGRPIVNLLPLEADERITAILPVREYEEGRHVFMATASGTVKKTAL
TEFSRPRSAGIIAVNLNEGDELIGVDLTDGSNEVMLFSANGKVVRFPESQVRSMGRTATG
VRGINLGEGDSVISLIVPRGEGDILTVTQNGYGKRTAVTEYPTKSRATQGVISIKVSERN
GQVVGAVQVETTDQIMMITDAGTLVRTRVSEVSVVGRNTQGVTLIRTAEDENVVGLQRVA
EPVEDEELDSIEPGEAIDDGTPLDDSDDGEVVDDADDENA
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaccttgccagagaaatcacaccggtaaacatcgaagacgaattgaaaagttcg
tatctggattacgcgatgtccgtcattgtcggacgtgcgctgccagatgttcgtgatggg
ctgaagccggtgcaccgccgcgttctgtacgcgatgaatgtactgggtaacgactggaac
aaaccctataaaaaatccgcccgtgtcgtcggggacgtgatcggtaaataccacccacac
ggtgacagtgcggtttacgacaccatcgtgcgtctggctcaaccgttctcgctgcgctac
atgctggtggacggtcagggtaacttcggttccgtcgatggcgattccgccgcggcaatg
cgttataccgaagtacgcatgtctaaaattgctcacgaactgctggcggacctggaaaag
gaaaccgtcgacttcgtgcctaactacgacggtaccgaacagatcccggcagtgatgcct
accaagatccccaacctgctggttaacggctcatcggggattgccgtcggtatggccacc
aacattccgccgcacaacctgtctgaggttatcagcggctgcctggcctatattgatgat
gaaaacatcagcatcgaagggctgatggaacacatcccagggccggacttcccgaccgcc
gccatcatcaatggccgtcgcggtatcgaagaagcctaccgtaccggtcgcggcaaggtg
tatatccgcgcccgtgccgaagtcgaagtcgacgccaaaacaggccgcgaaaccattatc
gttcacgaaattccctatcaggtgaacaaggcgcgtctgatcgaaaagatcgccgagctg
gtaaaggaaaaacgcgtcgaaggcatcagcgcactgcgtgacgagtccgataaagacggc
atgcgcatcgtggttgaagtgaagcgcgacgcggtgggtgaggtcgtactcaacaatctg
tattcgctgacccagttacaggtcactttcggcatcaacatggtggcgctgcatcagggg
cagccaaagctgctgaacctgaaagacatcctgcaagcctttgtgcgtcaccgccgcgaa
gtggtgactcgccgtaccatctttgaactgcgtaaagcccgtgaccgcgcccatattttg
gaagcgctggcgattgcactggccaacatcgatccgatcatcgagctgattcgccgcgcg
ccaaccccggcggaagccaaggttgcgctggtggcgcagccgtgggatctgggcaacgtg
ggtgcaatgctggaacgtgccggcgacgacgccgcgcgtccggaatggctggaaccagag
ttcggcatccgcgatggtaaatactacctgaccgagcagcaggcgcaggcgatcctcgat
ctccgcctgcaaaaactgaccggtctggagcacgaaaagttactggacgaatataaagag
ctgctgaactttattgccgagctgatctttattctgcaaagcccggatcgtctgatggaa
gtgatccgcgaagagctggaggcggtgcgcgatcagtttggcgaccaacgtcgtaccgag
atcaccgccaactcttccgacatcaacatcgaagacctgatcaatcaggaagacgtggta
gtgactctgtcgcatcagggctacgtcaagtatcagccgctgagcgactacgaagcacaa
cgtcgcggcggcaagggcaagtcggctgcgcgcatcaaagaagaagactttatcgaccgt
ctgctggtggccaacacccacgataccattctgtgcttctccagccgtggccgtctgtac
tggatgaaggtctatcaactgcctgaagccagccgcggcgcgcgcgggcgtccaatcgtc
aacctgttgccgttggaagccgacgagcgtatcaccgccattctgccggtacgcgagtat
gaggaagggcgtcacgtgttcatggcgaccgccagcggcacggtgaagaaaaccgccctg
accgagttcagccgtccacgcagcgccggcatcatcgccgtcaacctcaacgagggtgat
gagctgatcggtgttgacctgaccgacggcagtaacgaagtgatgctgttctctgccaac
ggtaaagtggtgcgcttccctgaatcgcaggtgcgttcgatggggcgtaccgctactggc
gtgcgcggcatcaacctgggtgaaggcgacagcgtcatctcgttgatcgtgccacgcggc
gaaggcgacattcttaccgtcacgcaaaacggttacggtaaacgtaccgcagtgaccgaa
tacccaaccaaatcgcgcgcgacccaaggggttatctccatcaaggtcagcgaacgtaac
ggtcaggtggtcggtgcggtgcaggtagaaactaccgaccagatcatgatgatcaccgat
gccggtacgctggtgcgtacccgggtatctgaagtcagcgtggttggccgtaatactcag
ggtgtcaccctgatccgcacggcagaagatgaaaacgtcgttggcttgcagcgcgtagcg
gagccggttgaagacgaagagctggacagcatcgaaccgggtgaagcgatcgacgacggc
acgccgttggacgacagcgacgacggtgaggttgttgacgatgcggatgatgaaaacgcg
taa
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