Serratia odorifera: NCTC11214_04118
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Entry
NCTC11214_04118 CDS
T06612
Symbol
fadD
Name
(GenBank) Long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sof
Serratia odorifera
Pathway
sof00061
Fatty acid biosynthesis
sof00071
Fatty acid degradation
sof01100
Metabolic pathways
sof01212
Fatty acid metabolism
sof02024
Quorum sensing
sof04146
Peroxisome
Module
sof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
NCTC11214_04118 (fadD)
00071 Fatty acid degradation
NCTC11214_04118 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
NCTC11214_04118 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11214_04118 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sof01004
]
NCTC11214_04118 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sof04147
]
NCTC11214_04118 (fadD)
Enzymes [BR:
sof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
NCTC11214_04118 (fadD)
Lipid biosynthesis proteins [BR:
sof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
NCTC11214_04118 (fadD)
Exosome [BR:
sof04147
]
Exosomal proteins
Exosomal proteins of breast milk
NCTC11214_04118 (fadD)
Exosomal proteins of breast cancer cells
NCTC11214_04118 (fadD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
VDZ62476
UniProt:
A0A447KXB8
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All DBs
Position
1:3762922..3764643
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AA seq
573 aa
AA seq
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MIISNDFRSNTLDKVWLKRYPADVPAEIDADRHSSLVEMFESAALRYADQPAFINMGEVM
TFRKLEERSRAFAAYLQNELGLQKGDRVALMMPNLLQYPIALFGVLRAGMVVVNVNPLYT
PRELEHQLNDSGAAAIVIVSNFAHTLEKVVFKTQIKHVILTRMGDQLSAAKGTLVNFVVK
YIKRLVPKYHLPDAISFRAALQRGRRLQYVKPDIINSDLAFLQYTGGTTGVAKGAMLTHR
NMQANLEQAKAAYAPLFRDGQELVVTALPLYHIFALTVNCLLFIDLGGRNLLITNPRDIP
GLVKELAKYPFTAMSGVNTLFNALLNNDDFHKLDFSTLRFSVGGGMSVQKSVADKWEKTT
GKHLLEGYGLTECAPLVAGNPYDLKHYSGSIGLPVPSTDVRLVDEHGNDVAPGEPGELWV
KGPQVMLGYWQRPEATDEVLKDGWLATGDIVTVDNDGFIRIVDRKKDMILVSGFNVYPNE
IEEVVSQHAKVLECAAIGVPSDVSGEAVKVCVVKKDASLTADELLTHCRRHLTGYKVPKI
VEFRDELPKSNVGKILRRELRDEQNKPKAADAA
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgattattagtaatgatttcaggagtaataccttggacaaggtctggttaaaacgttac
ccggcagatgttccggcagaaatcgacgccgatcgccattcgtctttggttgaaatgttc
gaaagcgcggcgctgcgctacgcagatcagccagcctttatcaacatgggcgaggtcatg
actttccgcaagctggaagagcgcagccgggctttcgccgcctatttgcaaaatgaactc
ggtttgcagaagggcgaccgtgtggcgttgatgatgcccaacctgttgcaatacccgatt
gcgctgtttggcgtcttgcgcgccggcatggtggtggtcaacgtcaatccgctttatacg
ccgcgcgagttggaacaccagttgaacgacagcggggcggcggcgatcgtcatcgtatcc
aactttgcccatacgctggaaaaagtggtattcaaaacccagatcaagcacgtaatcctg
acgcggatgggcgatcagctttccgccgccaaaggcacgctggtcaattttgtggtgaag
tacatcaaacggttggtgcccaagtatcacctgccggatgccatctcgtttcgcgccgcg
ctgcaacgcggtcgccggctgcaatatgtaaaaccggacatcattaattccgatctggcg
ttcttgcaatacaccggtggcaccaccggggttgccaagggcgcgatgctgacccaccgc
aacatgcaggccaatctggagcaggccaaggcggcctatgcgccgctgttccgtgacggt
caggagctggtggtgacggcgttaccgctgtatcacatttttgcactaacggtgaactgc
ctgttattcatcgatctgggtggtcgcaacctgctgatcaccaacccgcgtgatattccc
ggtctggtaaaagaactggccaaatacccgttcaccgccatgagtggggtaaataccttg
tttaatgcgctgctgaataacgacgacttccacaaactcgatttctcgaccctgcgtttc
tcggtcggcggcggcatgtcggtgcagaaatcggtggcggacaaatgggaaaaaaccacc
ggcaaacatttgctggaaggctatggcctgaccgagtgcgcgccgctggtggctggcaac
ccctacgatctgaaacattacagcggcagcatcggtttgccagtgccgtcgaccgacgtg
cgcctggtggatgagcacggcaatgatgttgcgccgggcgaaccgggtgaactgtgggtc
aaagggccgcaagttatgttaggctattggcagcgcccggaagcaacggatgaagtgttg
aaggacggttggctggcgaccggcgatatcgttacggtcgataatgacgggtttatccgc
attgtcgatcgcaagaaggacatgatcctggtgtcaggcttcaacgtatatccgaacgaa
atcgaagaggtggtcagtcagcatgccaaagtgctggagtgcgcggcgattggcgtgccg
agcgacgtttccggtgaggcggtgaaggtgtgcgtagtgaagaaggatgcctcactgacc
gctgatgagctgctgacgcattgccgtcggcatctgaccgggtataaagtgcctaaaatt
gttgagttccgcgacgaattgccaaagtccaacgttggcaagatcttgcggcgagaactg
cgtgacgagcagaacaagccaaaggccgctgatgccgcctga
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