Serratia odorifera: NCTC11214_04162
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Entry
NCTC11214_04162 CDS
T06612
Symbol
topB
Name
(GenBank) DNA topoisomerase 3
KO
K03169
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_04162 (topB)
Enzymes [BR:
sof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC11214_04162 (topB)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Topoisomerases
NCTC11214_04162 (topB)
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Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
VDZ62612
UniProt:
A0A447KXN2
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All DBs
Position
1:3806480..3808402
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AA seq
640 aa
AA seq
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MRLFIAEKPSLARAIADVLPKPHRRGDGFIACGNNDVVTWCVGHLLEQAQPDAYDNRYAR
WSLADLPIIPEKWQLQPRPSVSKQLNAIKKLLLEADEVVHAGDPDREGQLLVDEVLDYLS
LTPEKRQAVRRCLINDLNPQAVERAVGRLRDNREFIPLCVSALARSRADWLYGINMTRAY
TLLGRNAGYDGVLSVGRVQTPVLGLVVRRDEEIENFVPKDFFEVKAHIVTPKDERFVALW
QPSDSCEPYQDEEGRLLHRPLAEHVVARIEGQPALVTSYNDKRESDTAPLPFSLSTLQIE
AAKRFNLSAQQVLDICQRLYETHKLITYPRSDCRYLPEEHFAGRHAVLNAISAHQPDLYP
QPVIDSDRRNRCWDDKKVDAHHAIIPTARASKVNLTADELKVYGLVARQYLMQFCPDAVF
RKCVIELDIAGGKFVAKARFLAEAGWRTLLGSKERDEENEGAPLPVVAKDDRLLCERGEV
VARQTQPPRPFTDASLLSAMTGIARFVQDKSLKKILRATDGLGTEATRAGIIELLFKRSF
LYKKGRYIHSSETGRALIHSLPDIAARPDMTAHWEATLTQISEKSCRYQDFMQPLVGTLQ
QLIYQAKQSRASMAFRGLPAPNAGAKKRKKSAGKAREKSE
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcgactgtttatagccgaaaaaccgagtttggcacgcgccattgctgatgttttaccc
aaaccgcatcgtcgtggcgatgggttcatcgcctgcggcaacaacgatgtggtgacctgg
tgcgtaggtcacctgttggagcaggctcagcctgacgcctacgacaaccgctatgcgcgc
tggtcgctggcggacttgccgatcattcccgaaaaatggcagctacagccacgtccttcc
gtcagcaagcaattgaatgcgattaaaaaattgctgttggaagccgatgaggtggtacac
gccggtgacccagatcgcgaagggcaactgctggtggacgaggtgctggattatttgtcg
ttgacgccggaaaagcggcaggcggtacggcgttgtctgatcaacgatctcaacccccag
gcggtagagcgggcggttggccgcttgcgtgataaccgggagtttataccactgtgcgtt
tctgccctggcgcgttctcgtgccgactggctgtatggcattaatatgacccgtgcctat
acgctgttaggccgtaatgccggttacgatggcgtgctgtcggttggccgggtgcaaacg
cccgtgctgggcctggtggtgcgccgtgacgaagagattgaaaacttcgtgccgaaggat
ttttttgaggtcaaggcgcatatcgttacgccgaaagacgagcgcttcgtggcgctgtgg
caaccgagcgattcgtgtgagccgtatcaggacgaagaggggcggctgctgcatcggccg
ctggccgagcatgtggtggcgcgcattgagggtcaaccggccctcgtcacctcctataat
gataaacgggaatcagatactgcaccgctgccgttttcgttatcgaccttgcagattgag
gccgccaaacggtttaatctcagcgcgcaacaggtgctcgacatctgtcagcggttgtat
gaaacacacaagctgatcacctatccgcgttccgattgccgctacctgccggaagaacac
tttgccggccgccatgcggtactgaatgccatcagtgcacatcagccggatctgtaccct
caaccggtgatcgacagcgatcgccgtaaccgttgctgggatgataaaaaagtcgatgcc
caccatgccattattcctaccgctcgtgccagcaaagtcaatttgaccgccgatgaattg
aaggtgtatggcttggtggcgcggcagtatctgatgcagttctgtccggatgcggtgttc
cgcaaatgcgtgatcgaactggatatcgccggtggtaaattcgtcgccaaggcgcgtttt
ctggcggaagccggttggcgcacgctgcttggcagtaaagagcgcgacgaggagaatgaa
ggcgcgccactgccggtagttgccaaggacgatcggctgttgtgtgagcgtggcgaagtg
gtggcacgtcagactcagccgccgcgccccttcaccgatgccagcctgctttccgccatg
accgggattgcgcgcttcgtgcaagataaatcattaaagaaaatcctgcgagcgaccgat
ggtttaggtaccgaggctacgcgagcgggaatcattgaattgttgttcaaacggtcgttc
ctgtacaaaaaagggcgctatatccattccagcgaaaccggtcgggcactgattcattcg
ctgcctgatatcgcggcacgtcctgatatgaccgctcactgggaagccacgttgacgcaa
atcagtgaaaagtcctgtcgttatcaggattttatgcagccactggtaggcaccttgcaa
cagctgatttatcaggccaagcagagtcgggcgagtatggcgttccgcggtttacctgca
ccgaacgccggggcaaaaaagcgcaaaaaaagcgccggcaaggcgcgggagaagagtgaa
tga
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