Serratia odorifera: NCTC11214_04472
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Entry
NCTC11214_04472 CDS
T06612
Symbol
qseD
Name
(GenBank) Quorum-sensing regulator protein D
KO
K21645
LysR family transcriptional regulator, hypochlorite-specific transcription factor HypT
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sof03000
]
NCTC11214_04472 (qseD)
Transcription factors [BR:
sof03000
]
Prokaryotic type
Helix-turn-helix
LysR family
NCTC11214_04472 (qseD)
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GFIT
Motif
Pfam:
HTH_1
LysR_substrate
Motif
Other DBs
NCBI-ProteinID:
VDZ63427
UniProt:
A0A3S4FUH7
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All DBs
Position
1:complement(4101059..4101985)
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AA seq
308 aa
AA seq
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MQNRHHLELTWLEDCVALAASLNFSRAAASRYVTQPAFSRRIQSLEEWLGTPLFERNRRG
VSLTRAGEVFIKQVPDLIRALYTLRNEVIDASGDAKPDVIFSATHSLSFSFFPTLMRNND
KIARFGSFRLLSDTLSACERMIGKGDAQFLLCYYHPHMHINLEQEKFLSVRLGRETLIPY
SRRDAASGQPIWRISGGRKFPYLSFSAESGLGRIIANTSSVNRAKRGMEQVFTADLAATL
LAMVKAGDGIAWLPETLAQADVQAGNLAAAAASDSGVWVPIDIRLFRPAGKMSRAVEALW
DIFVDEQC
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggcatcacctggagttgacctggcttgaagactgcgttgcgctggcagcg
tcgctgaatttttcccgtgccgcggcttcccgatatgtgacccagcctgcattcagtcgg
cgtatacagtcgttggaagagtggctgggaacgccgctttttgaacgaaaccggcgcggc
gtcagcctgacgcgagcgggtgaagtgtttatcaaacaggtaccggatctgatccgcgcg
ctgtatacgctaagaaacgaggtgattgatgcctcaggggacgcaaagccggacgtcatt
ttctctgccactcactcgctctcgttctcctttttccccacgctgatgcgtaacaacgac
aagattgcccgcttcggctcctttcgactgctctctgacaccctgagcgcctgcgaaaga
atgatcggcaaaggcgatgcgcagttcctgctgtgttattaccatccgcacatgcatatc
aaccttgagcaggaaaagttcctcagcgttcgtctcgggcgggaaaccttaatcccctat
agccggcgcgatgccgctagcggtcagccgatatggcgtatttccggcggcaggaagttc
ccttatctgtctttctcggcagaatcaggactcgggcggattattgccaatacgtcgtcg
gtaaatcgtgccaaacgggggatggagcaggtgtttaccgccgatctggctgcgacgttg
ctggcaatggtcaaggccggcgatggcattgcctggttgccggaaacgctggcgcaagcc
gacgtacaggcgggcaaccttgcggcggcggcagcgagcgacagcggcgtttgggtgccg
atcgacatcaggctgttccgtccggccggcaaaatgtcgcgggcggtcgaagcgctgtgg
gatattttcgtcgatgagcaatgctga
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