Serratia odorifera: NCTC11214_04640
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Entry
NCTC11214_04640 CDS
T06612
Symbol
ycfS_2
Name
(GenBank) Probable L,D-transpeptidase YcfS precursor
KO
K19236
L,D-transpeptidase YcfS
Organism
sof
Serratia odorifera
Pathway
sof01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
NCTC11214_04640 (ycfS_2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sof01002
]
NCTC11214_04640 (ycfS_2)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sof01011
]
NCTC11214_04640 (ycfS_2)
Peptidases and inhibitors [BR:
sof01002
]
Cysteine peptidases
Family C82
NCTC11214_04640 (ycfS_2)
Peptidoglycan biosynthesis and degradation proteins [BR:
sof01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC11214_04640 (ycfS_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
VDZ63780
UniProt:
A0A3S4FUS7
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All DBs
Position
1:complement(4261974..4262552)
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AA seq
192 aa
AA seq
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MKRALTLMGVLFATVLAGTQAASATEYPLPPADSRLIGENTIYTVPNDGRSLEAIAADYQ
IGLLGMLEANPGTDPYLPKPGSVLTIPTQMLLPDTPREGIVVNLAELRLYYYPKGENKVI
VYPIGIGQTGMHTPLKVTSVSQKIPNPTWTPTANIRKRYAAQGVTLPGVVPAARKTRWAC
LPCVCPWGTAST
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgtgcgttgactttaatgggcgtgttattcgccaccgtcctggccggcacgcaa
gccgccagcgcgaccgaatatccgctgccaccggctgatagccgtctgattggcgaaaac
accatttacaccgtgccgaacgatgggcgttcgctggaggcaatcgccgctgattatcaa
atcggcctgttgggcatgctggaagccaatccgggcaccgatccttacctgccgaaaccc
ggctcggtactgactattccaacccagatgctgttgccggacacgccgcgcgaagggatt
gtggtgaacctggctgaactgcgtctgtactattacccgaaaggcgaaaataaagtgatc
gtctacccgatcggtattggccagaccggcatgcatacgccgctcaaggtcacctctgtc
agccagaaaataccgaacccgacctggacgccaaccgccaacatccgcaagcgctatgcc
gcgcagggcgtgacattgccgggtgtggtgccggccgcccggaaaacccgatgggcctgt
ttgccatgcgtttgtccatggggcacggcgagtacctga
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