Serratia odorifera: NCTC11214_05024
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Entry
NCTC11214_05024 CDS
T06612
Symbol
hbpA_3
Name
(GenBank) Hemin-binding lipoprotein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
sof
Serratia odorifera
Pathway
sof02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
NCTC11214_05024 (hbpA_3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sof02000
]
NCTC11214_05024 (hbpA_3)
Transporters [BR:
sof02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
NCTC11214_05024 (hbpA_3)
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Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
VDZ64533
UniProt:
A0A3S4DSX5
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Position
1:complement(4599957..4601525)
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AA seq
522 aa
AA seq
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MKAFAPTLMFLAMAGSFNLQAATPANTLVIAQSIDDAISFDPAQGFELTTVQALNSLYQR
LLQSDPRNPVDLKPTLAEKWQAGSDNRSLTFTLRPEAKFSSGNPLRPEDVIFSLSRVVKL
NLEPSFILTQLGWNGQNVDQFLSKVDERTVKISWRAEVSPAFVLSLLSAPVSSIVDARQV
QAHQQGNDLGNQWLSSHSAGSGPYQLRTYVPHEVVVLEANPGSPEGAPKLKTVLIKNVPD
AAARRLLIEQGDADIARNLGADQMAALKDKPGVKPLAIPYASLYFLQFNAKASPALGNPA
FWEAARWLFDYQGIADDLLKGQFQNHQAFLPDGYLGALQQRPYRFDPQRAKQILAKAGLN
NVSFKLDVNNQPPYLDIAQALQASFAQGGVKVELVPGISSQVSTKVKSLNYDATLTSWGP
DYFDPNTNAAAFAYNPQDGSKTLAWRANWHIPALNALTLAATAENDTAKRVADYQQLQRQ
VQQSSPFVIGLQARSLIAVRDNLKGYVQGINPDMVFYSQVTK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttcgcgcccactctgatgtttttggctatggcaggcagtttcaatttacag
gcggcaaccccggctaatacgctggtgattgcccaatcgatcgacgatgcgatcagtttt
gatccggcgcagggatttgaactgaccaccgtacaggcattaaacagcctgtatcagcgg
ttgttgcagtccgacccgcgcaatcctgtcgatctcaaaccgactctggcggaaaagtgg
caggcgggcagcgataaccgcagcctgacctttaccctgcggcccgaggccaaattttcc
agcggtaatccgctacggccagaagacgtgattttctcgctgtcgcgggtggtcaagttg
aacctggaaccgtcgtttatcctgacccaactgggctggaatgggcaaaatgttgatcaa
ttcctgagcaaggtggatgagcggacggtaaaaatcagttggcgtgccgaggtcagcccg
gccttcgtgctcagcctgttgtcggcgccggtatcgtcgatcgtcgacgccagacaggta
caggcgcatcagcaaggcaacgatctgggtaaccagtggctgagcagccactctgcgggc
agcggtccataccagttgcgcacctacgtgccgcatgaagtggtggtgctggaagccaat
ccgggctcgccagaaggcgcccccaaactgaaaacggtgctgatcaagaacgtcccagat
gctgccgcacgtcgcttgctgatcgaacagggtgacgccgatatcgcccgtaacctgggt
gccgaccaaatggcggcgctgaaagacaagccgggcgtgaaaccgttggcgatcccctat
gcgtcgctgtatttcctgcaattcaacgccaaggcttcgccggcgctggggaatccggca
ttctgggaggcggcgcgttggctgtttgactatcagggcattgccgacgatctgctgaaa
ggccagttccagaatcatcaggcgttcttgccggacgggtatcttggcgctttgcaacag
cgtccctaccgctttgatccgcagcgcgccaaacagattttggccaaggccgggctgaac
aacgtcagtttcaaactggacgttaacaaccagccaccgtacctcgatattgcgcaggcc
ttgcaggccagctttgcccagggtggggtgaaggtggaactggtgcccggcatcagttcg
caagtatcgaccaaggtaaagtcgcttaactatgacgccacgctgacctcgtgggggcca
gactattttgacccgaacaccaacgccgccgccttcgcctataatccgcaagacggcagt
aaaactctggcctggcgcgccaactggcacatcccggcgttgaatgcgctgaccctggcc
gcaacggcagaaaacgataccgccaaacgggtagcggattatcagcaactgcaacgacag
gtacagcaaagttcgccgtttgtcattggcctgcaggcgcgcagcctgattgcagtgcgc
gataatctgaaaggctatgtgcagggcatcaatcccgacatggtgttttacagccaggtc
accaagtaa
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