Serratia odorifera: NCTC11214_05098
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Entry
NCTC11214_05098 CDS
T06612
Name
(GenBank) murein L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sof01002
]
NCTC11214_05098
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sof01011
]
NCTC11214_05098
Peptidases and inhibitors [BR:
sof01002
]
Cysteine peptidases
Family C82
NCTC11214_05098
Peptidoglycan biosynthesis and degradation proteins [BR:
sof01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
NCTC11214_05098
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
VDZ64676
UniProt:
A0A447L125
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Position
1:complement(4677767..4679608)
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AA seq
613 aa
AA seq
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MLLIKGSTVRRLALSCAIAGSFAASLPAWATVPAFPAASSSMSVAQSRSELVAALPGGVT
PHYLSTLAPLYAANQMQPMWQDREAVQQFQQQLAELAISGIQPQFTQWVRQLTDPAISDM
GRDIVLSDAMLGYLQFVSSIGANGNNWLYSNIPYKLATPPGTVINQWQLAVRQGKAQAYV
ESLAPQHPQYAKMHQALRDMLADSRPWPRLANGPSLRPGEISNDIPALREILQRTGMMSD
IPAASLPAQQPTVVNRAAAPVADDDLSVDEEALRENRGTVVSPSAAPVDNITAPTDGALL
QQPPAAASMADNLYSSELVEGVKRFQKWQGLSTDGIIGVRTREWLNVSPQMRASLLALNI
QRLRILPGRVSNGIMVNIPNYSLVYYQNGNEVLSSRVIVGRPSRKTPMMSSALNNVVVNP
PWNVPTTLVREDIVPKAMRDANYFRKHGYTVLSGWSNDAEVIDPSMIDWNMVSARNFPYR
IRQAPGATNSLGRFKFNMPSSDAIYLHDTPNHNLFQKDIRALSSGCVRVNKASDLANMLL
QDAGWNNSRVSSTLKQGNTTYVNVRQHIPVKLYYLTAWVSDDGKPQFRTDIYNYDNTVRS
GAQILAQAEKLMQ
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttataaaaggaagcactgtacgacgtctggcgctgagttgcgcaattgcaggt
agttttgccgcgtcgttacccgcatgggccaccgtgccggcgtttcccgccgcgtcctcc
agcatgtcggtcgcgcaaagccgttccgaactggttgcggcgttgcctggcggcgtgaca
ccgcactacctttcaaccttggcaccgttgtatgcggccaatcagatgcagccgatgtgg
caggatcgcgaggcggtgcagcagttccagcaacaattggcggaactggccatttctggc
atacagccgcagtttacccaatgggtcaggcaactgaccgatccggccatcagcgatatg
ggccgggatatcgtcctgtccgacgccatgctcggttatctgcagtttgtgtcgtcaatc
ggcgccaacggcaacaactggttatacagtaatattccgtacaaactggccacgccgccg
ggtaccgtcatcaaccagtggcagttggcggtgcggcagggcaaggcgcaggcgtacgtt
gagtcgctggcgccacagcacccgcaatatgccaaaatgcatcaagcgctgcgtgacatg
ttggccgatagccgcccctggccgcgactggctaatgggccgagcctgcgaccgggcgag
atcagcaacgatatccccgcgctgcgtgagatactgcagcgtaccggcatgatgagcgat
attcccgccgccagtctgcctgcgcaacagccgacggtggttaatcgcgctgccgcaccg
gtggcggatgacgatttatccgttgatgaagaagcgctgcgcgagaaccgcggcacggtg
gtcagcccgtcggcggcgccggtggataatatcactgcgcccaccgacggcgcgctattg
cagcagccgccagcagcggcatcgatggctgacaatctgtattccagcgaactggtcgag
ggtgtgaagcgctttcagaaatggcaggggctgagtaccgacgggatcatcggcgtgcgg
acgcgcgaatggctgaacgtgtcgccgcaaatgcgagcgtcgctgctggcattgaacatt
cagcggctgcgtatcctgccaggacgcgtcagcaacggcatcatggtcaatattcccaac
tattcactggtctattaccagaacggcaatgaagtgctgtcgtcgcgggtgatcgttggt
cgccccagccgcaagacgccgatgatgagcagcgcattgaataatgtggtggttaacccg
ccgtggaacgtaccgaccacgctggtgcgtgaagacatcgtgccgaaagcgatgcgtgac
gccaactatttccgtaaacacggctataccgtgctttccggctggagcaacgatgccgaa
gtgattgatccgtcaatgattgactggaatatggtatcagcgcgcaacttcccgtatcgc
attcgtcaggcaccgggcgccaccaactcgctgggtcgtttcaaattcaatatgcccagt
tcggatgccatctatctgcacgatacgccgaatcataatctgttccaaaaggatatccgt
gcgctcagttccggttgcgttcgggtaaataaggcgtccgatttggccaatatgctgttg
caggatgccggttggaacaatagccgcgtttcttcaaccctgaaacagggaaataccacc
tatgtcaatgtacgtcagcatatcccggttaaattgtattatttaaccgcctgggtatct
gatgacggaaagccacaattccgtacagatatttacaattacgataatacggtgagatcc
ggcgcacaaattttggctcaggccgaaaaattaatgcaataa
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