Serratia odorifera: NCTC11214_05179
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Entry
NCTC11214_05179 CDS
T06612
Name
(GenBank) YcaO-like family
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sof03009
]
NCTC11214_05179
Ribosome biogenesis [BR:
sof03009
]
Prokaryotic type
ribosomal protein modification factors
NCTC11214_05179
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GFIT
Motif
Pfam:
YcaO
YcaO_C
Lipase_GDSL_3
Motif
Other DBs
NCBI-ProteinID:
VDZ64838
UniProt:
A0A3S4DT88
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All DBs
Position
1:4748828..4750591
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AA seq
587 aa
AA seq
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MTQTFIPGKDAALEDSISRFQQKLSDLGFNIEEASWLNPVPHVWSVHIRDRDCPLCFTNG
KGASKKAALASALGEYFERLSTNYFFADFYLGKQIAEGDFVHYPNEKWFPIPEDDSLPAG
ILDQRLHAFYNPEQEVRASELIDLQSGNGDRGICALPFTRQSDQETVYIPMNIIGNLYVS
NGMSAGNTASEARVQGLSEVFERYVKNRIIAESISLPEIPAEVLNRYPGVVEAIAKLEEE
GFPILSYDASLGGDYPVICVVLFNPANGTCFASFGAHPDFGVALERTVTELLQGRSLKDL
DVFTAPTFDDEEVAEHANLETHFIDSSGLISWDMFKRDADYPFVDWSFSGSTQQEFATLM
EIFKKEDAEVYIADYEHLGVYACRIIVPGMSDIYPAEDLLLANNSMGAHLRDLLLALPDS
DWAPEEYLALIERLDDEGLDDFTRVRELLGIASGKDNAWHTLRVGELKSMLALAGGDMDQ
ALIWTEWTQDFNASVLSAQRSNYYRCLQTLLLLAQEPDRDPAQYYGAFVKMYGQEAVDAA
SAAMSGEARFNGLFAVDSDLQALPAHQALLAAYEKLQQAKRRHWAKA
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgacgcagacttttatccccggtaaagacgccgcgctggaagattccatcagccgtttc
caacagaaattaagcgacctgggtttcaatatcgaagaagcttcctggcttaatccggtt
ccacacgtttggtcggtgcatattcgcgatcgcgattgcccgctgtgcttcaccaacggc
aaaggcgccagcaaaaaagccgcgctggcttccgctttgggcgaatatttcgaacgcttg
tcgaccaactatttctttgccgacttctacctgggcaagcagatcgccgagggcgatttc
gtacattatcccaacgagaagtggttcccgatcccggaggatgattccctgccggccggt
atcctcgatcagcgcctgcatgcgttctacaatcctgagcaggaagtacgcgccagcgaa
ctgatcgacctgcaatccggtaatggcgatcgcggtatctgtgcattgccgttcacccgc
cagtccgatcaggaaacggtatatatcccgatgaacatcatcggcaatctgtacgtttcc
aatggcatgtcggccggcaacaccgccagcgaggcgcgtgtgcaaggcctgtcggaagtg
ttcgagcgctatgtcaaaaaccgcatcatcgccgagtcaatcagcctgccggagatcccg
gccgaggtgctgaaccgctatcccggggtggttgaagccatcgccaaactggaagaagaa
ggcttcccgatcctgtcctatgatgcttcgctgggcggcgactacccggtgatctgcgtg
gtattgttcaacccggccaacgggacctgttttgcctcgttcggtgcccatcccgatttc
ggcgtagcgctggagcgcaccgtgaccgagctgttgcagggccgcagtctgaaggatctc
gacgtgttcaccgcgccgaccttcgatgacgaagaagtggccgaacacgccaacctcgaa
acgcactttattgattccagcggcctgatttcctgggatatgttcaagcgggatgcggat
tatcccttcgtcgactggagcttcagcggcagtacccagcaagagttcgcaaccctgatg
gagatcttcaagaaagaagacgcggaagtgtacatcgccgactatgaacatctgggcgtc
tacgcctgccgcatcatcgtaccggggatgtccgacatttatccggccgaagatctgctg
ctggccaacaacagcatgggcgcacatctgcgcgatctgctgctggcgctgccggacagc
gactgggcgccggaggaatatctggcgctgatcgaacgtctggatgatgaagggctggat
gatttcacccgcgtacgcgaactgttgggcattgcctccggtaaggacaacgcctggcac
acgctgcgcgtcggtgagctgaagtcgatgctggcgctggccggcggcgatatggatcag
gcgctaatctggaccgaatggacgcaggacttcaacgcctcggtgcttagcgcgcaacgc
agcaactattaccgctgtctgcaaacgctgttgctgctcgcgcaggaaccggaccgcgat
ccggcccagtactacggcgcctttgtgaagatgtacggccaggaagccgttgatgccgcc
tccgcggccatgagcggcgaagcgcgttttaacggtctgttcgccgtcgacagcgatctg
caagcactgccggcgcaccaggcgctgttggctgcctacgaaaaactgcagcaggcgaaa
cgccgccactgggcaaaagcctaa
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