Serratia odorifera: NCTC11214_05229
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Entry
NCTC11214_05229 CDS
T06612
Symbol
ybbH_3
Name
(GenBank) Uncharacterized HTH-type transcriptional regulator ybbH
KO
K19337
RpiR family transcriptional regulator, carbohydrate utilization regulator
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sof03000
]
NCTC11214_05229 (ybbH_3)
Transcription factors [BR:
sof03000
]
Prokaryotic type
Helix-turn-helix
Other families
NCTC11214_05229 (ybbH_3)
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Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
HTH_IclR
MarR
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
VDZ64940
UniProt:
A0A3S4DTC5
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Position
1:4797458..4798282
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AA seq
274 aa
AA seq
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MNSGNLLLRLRQDLAGYSPTLHKLGNYVIEQPSRVLYFTITELARESGTSEASVTRLCRH
LGCKGYTEFKMALALCVQQGTQETANDRSISESLVEESVQALRDTGALLDRLALQQAALA
LHQARSIQIYGVAASAIIGDFLQYKLLRLGKPALLFSDMHRAAMNAASLAENDVAIAISS
SGSTKDVLHAVTLAKQRHAQVIVISNNQRSPLAKLANTLLVAAKPEGPLNAGALPAKVGA
MLLVELMATELAQRDAAYLQSVQTTASATLPLLL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgaatagcggaaatttgttgttgcggctgcgacaagatttggcgggttacagcccgacg
ctgcacaaattggggaattatgtcatcgagcaaccgtccagggtgctctacttcacgatt
accgaactggcacgcgagagtggcaccagcgaagccagcgttacgcgactttgccgccac
ctgggctgcaaggggtataccgaattcaagatggcactggcactgtgtgtgcagcaaggc
acacaggaaacggccaacgatcggagcatcagcgaatcactggtggaagagagcgtgcag
gcgctgcgcgataccggagcgctgctcgatcggctggccttgcagcaagcggcactggcg
ctgcatcaggcccgctcgatacagatttatggcgtcgccgccagcgcgattatcggcgat
tttctgcagtataaactgttgcgtctcggcaagccggcgctgctgttcagcgatatgcac
cgggcggcaatgaatgccgcatcgctggcggaaaacgacgtggcgatagccatttccagt
tccggctccaccaaagacgttctgcatgcggtgaccctggcgaagcaacgtcatgcgcag
gtgatcgtcatcagcaataaccagcgcagcccgctggcaaaactggcaaatactctgctg
gtggccgccaaacccgaaggaccgctgaacgccggcgcgctgccggccaaggtcggggcg
atgttgctggtagaattaatggcgaccgaactggcgcaacgtgatgccgcctatctgcag
tcggtacaaaccaccgccagcgccacgctgccgctattgctgtag
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