Serratia odorifera: NCTC11214_05664
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Entry
NCTC11214_05664 CDS
T06612
Symbol
phrB_2
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sof
Serratia odorifera
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_05664 (phrB_2)
Enzymes [BR:
sof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCTC11214_05664 (phrB_2)
DNA repair and recombination proteins [BR:
sof03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC11214_05664 (phrB_2)
Prokaryotic type
NCTC11214_05664 (phrB_2)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
E3_UbLigase_R4
DPRP
DUF6231
Motif
Other DBs
NCBI-ProteinID:
VDZ65827
UniProt:
A0A3S4F3G2
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All DBs
Position
1:complement(5179150..5180094)
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AA seq
314 aa
AA seq
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MTTHLVWLRNDLRVTDNQALYAACRDPQATVMAVFIATPQQWRQHHMAARQAAFIHATLR
QLQQALAQRGIPLVTQQCDDFAAAVDWLADFCQASHVDALFYNRQYELNERRRDRQLEQR
LNGMVNCQAFDDSLLLPPGSVLSGNGEMYKMYTPFRRAFLARLAESDIASLPAPAQRSCG
QWQAITPPAPFDYPAAELDDGFPAGEEAALRRLRHFCRQQVQDYHHQRDIPAVDGTSVLS
PYFGGRRAVTTAMCQSAACRMSRYAGQSARRCFLLVERADLARILPSFAGGESGVVPPPS
LYCLDRPGTLEPGG
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaccacccatctggtctggttgcgtaacgatttgcgtgtcaccgacaaccaggcgctg
tatgccgcctgtcgcgatccccaggccacggtgatggcggtatttatcgccacgccgcag
caatggcggcaacatcatatggctgcgcgtcaggcggcgtttattcacgccacgctgcgg
cagttgcaacaggcgttggcgcagcgcggcatcccgctggtcacccagcaatgtgacgat
tttgccgccgccgtcgattggctggctgatttctgtcaggcttcgcacgttgatgcgctg
ttttacaatcgccaatacgaattgaatgaacgacggcgcgaccgccagctggaacagcgt
ctgaacggcatggtgaactgccaggcgtttgatgacagtctgttgctaccacccggcagc
gtactgagcggtaacggcgaaatgtataaaatgtatacgccgtttcgccgggcgtttctg
gcgcgtttggcggagtctgacattgccagtctgccggcgcccgcgcagcggtcctgcggt
cagtggcaggccatcacgccgccggcgccgttcgattatcccgccgctgagcttgacgac
gggttcccggcgggagaggaggcggcgctgcgccggctgcgccatttttgccggcagcag
gtgcaggactaccatcatcaacgcgatattcctgcggttgatggcaccagcgttctgtca
ccctattttggcggtcggcgcgctgtcaccacggcaatgtgtcaatcggctgcgtgccga
atgtccagatatgctggccaatccgcacggcggtgctttctgctggttgaacgagctgat
ttggcgcgaattttaccgtcatttgctggtggcgaatccggcgttgtgccgccaccgtcc
ctttattgcctggacagaccgggtacgctggaacccggcggctga
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