Serratia odorifera: NCTC11214_05728
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Entry
NCTC11214_05728 CDS
T06612
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
sof
Serratia odorifera
Pathway
sof03030
DNA replication
sof03430
Mismatch repair
sof03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sof00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC11214_05728 (holA)
03430 Mismatch repair
NCTC11214_05728 (holA)
03440 Homologous recombination
NCTC11214_05728 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sof03032
]
NCTC11214_05728 (holA)
03400 DNA repair and recombination proteins [BR:
sof03400
]
NCTC11214_05728 (holA)
Enzymes [BR:
sof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC11214_05728 (holA)
DNA replication proteins [BR:
sof03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC11214_05728 (holA)
DNA repair and recombination proteins [BR:
sof03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC11214_05728 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delt_C
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
VDZ65947
UniProt:
A0A3S4HUA0
LinkDB
All DBs
Position
1:5236500..5237534
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AA seq
344 aa
AA seq
DB search
MIRLYPEQLAAQLREGLRACYLLSGNEPLLLQESQDLIRQAAQQQQFSEHYSISLDAHTD
WDAIFSICQAMSLFASRQTLLLILPENGPTAPIGEQLVKLSSLLHDDILLMLRGPRLTKA
QENSAWFKALSPNGVYVTCQTPEQAQLPRWVATRAKTMKLEVDDAANQLLCYCYEGNLLA
LAQALERLSLLYPDGKLTLPRVEQAVNDAAHFSPYHWLDALLAGKSKRAWHILQQLQQED
AEPVILLRTLQRELLMLLTLQRRMASAPLRTLFDQHKVWQNRRNLITQALQRLSAAQLQQ
AVHLLTQIEITLKQDYGQSVWPQLESLSMLLCGKPLATSVPDAH
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgatccgcctttaccctgaacaacttgccgcgcagctccgagaggggctgcgcgcttgt
tatttactgagcggcaatgaaccgctgttattgcaggaaagccaggatctgattcggcag
gccgcgcaacagcagcagttcagcgaacactacagcatttccctcgatgcccacaccgac
tgggatgccatcttcagcatctgccaggcgatgagcctgttcgccagccggcaaacgcta
ctgctgatattgccggaaaatggcccgacggcgccgattggcgaacaactggtgaaactg
tccagcctgctgcacgacgatattctgctgatgctgcgcggcccgcgtctcaccaaggcg
caggaaaacagcgcctggttcaaggcactgagcccgaacggcgtttacgtcacctgccag
acgccggaacaggcgcaactgccgcgctgggtggccacgcgcgccaaaacgatgaagctg
gaagtggatgacgccgccaaccaactgttgtgttactgctacgaaggcaatctgctggcg
ttggcacaggcgctggaacggctgtcactgttgtatccggacggcaaactgacgctgccg
cgcgttgagcaggcggtaaacgatgccgcgcacttctcgccatatcactggctggatgcg
ctgctggccggcaaaagcaaacgtgcctggcatatcctgcaacagctgcaacaggaggac
gccgagccggtgatcctgctgcgcacgctgcagcgcgagctgctgatgttgctgacgctg
caacgccgcatggccagcgcaccgctgcgtaccctcttcgaccagcacaaagtctggcag
aatcgccgtaacctgatcacccaggcgctgcagcggctgtccgccgcccagttgcaacag
gcggtgcacctgctgacgcagattgaaatcacgctgaaacaggactacggccaatcggta
tggccacaactggagagcctgtcgatgctgctgtgcggtaaacctctggccacgagcgtc
cccgatgcccactaa
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