Shewanella oncorhynchi: RA178_00410
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Entry
RA178_00410 CDS
T09381
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00061
Fatty acid biosynthesis
sog00071
Fatty acid degradation
sog01100
Metabolic pathways
sog01212
Fatty acid metabolism
sog02024
Quorum sensing
sog04146
Peroxisome
Module
sog_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RA178_00410
00071 Fatty acid degradation
RA178_00410
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RA178_00410
09145 Cellular community - prokaryotes
02024 Quorum sensing
RA178_00410
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
sog01004
]
RA178_00410
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sog04147
]
RA178_00410
Enzymes [BR:
sog01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RA178_00410
Lipid biosynthesis proteins [BR:
sog01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RA178_00410
Exosome [BR:
sog04147
]
Exosomal proteins
Exosomal proteins of breast milk
RA178_00410
Exosomal proteins of breast cancer cells
RA178_00410
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Cas9_C
Motif
Other DBs
NCBI-ProteinID:
WMB73134
UniProt:
A0AA50Q3G0
LinkDB
All DBs
Position
90051..91859
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AA seq
602 aa
AA seq
DB search
MSLDQYHVIRLLQQQSESLKDAVALEGFEMAAPWYQVSWQAFDQISSKIAQVLIELGVQV
QDRCVILAQNCPQWTCADVGTLKTRAVVVPIYPTSTVEQASFIVNDATAKVIFVDDAKQY
AMACELQALCPSLEHVIVFDASVTLAADKANQHWHLDTLLAGDTQLNIEQEAELNQRLQA
ANLDDLLTLIYTSGTTGDPKGVMLDYRNMASTIRQHDQKLAFHSGDVSLAFLPLSHVFER
SWSFYVLCRGGHNVYLQNTQRVKEAISAVRPHTLCVVPRFLEKVYSAVQDKVAKSADGRK
KLFAWAMRVGQRQFEVGQGRAKGGLWLSLQWRLAHKLVYSKLQAVLGGRLKFMPCGGAAL
DVNVGSFFHAINIPVLCGYGMTETNATVTCNTLGNRVPGSNGQPLLETEIKLGKDDEILV
RGATVMRGYYNRPEDTAAAFEDGWLKTGDAGRFDANGNLFITDRIKELMKTSNGKYIAPQ
RVEGAVGCCPFIEQVAIIADARNYVTALIVPAFESLEAWAKDKGLKYESPLELLRHSHVV
EHFEQRLKQLQHELAGFEQIKKFTLLPEAFSMEAGLITPTLKLRRKMIYHKYAHEINAMY
NN
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgatcaatatcatgttattcgactactacagcagcagagcgagtctttaaaa
gacgcagtagcgctggaaggttttgaaatggccgctccttggtatcaggtgagttggcaa
gccttcgaccaaatcagcagtaaaattgcacaagtgttgatcgaacttggcgtacaagtg
caagaccgttgcgttattctggcgcaaaactgcccgcagtggacttgtgccgatgtcggc
actctcaaaactcgcgccgttgtagtgccaatttatcccaccagtaccgtcgaacaggcg
agctttatcgttaacgacgccactgctaaagtgatttttgttgacgatgctaagcaatac
gctatggcgtgtgagttgcaagccttatgcccaagcctagagcatgtgattgtattcgat
gccagcgtgacactcgctgccgataaggccaatcagcattggcatctagataccctactg
gcgggtgacactcagttaaacattgagcaagaagccgagcttaatcagcgtttacaagct
gcaaatctcgatgatttactgaccttaatttatacctccggcacgacgggcgatcctaaa
ggcgtgatgctggattaccgtaatatggcgtctaccatacgccagcacgatcaaaaattg
gccttccattctggcgatgtgtctttggcatttttgccattgagccatgtatttgagcgc
agttggagtttctacgtcttgtgccgtggcggccataacgtctatctgcaaaatacccaa
agagtgaaagaggcgattagcgccgtgcgtccacataccttgtgtgtggtgccgcgtttc
ctcgaaaaagtgtatagcgccgtacaagataaagtcgccaaatcagccgacggtcgtaag
aagttgtttgcttgggcgatgcgcgttggccaacgtcagttcgaagtaggccaaggtcgt
gctaagggcggattgtggttgtcgctgcaatggcgtttggcgcacaagctggtgtatagc
aagctgcaagccgtgctcggtggccgtttgaagtttatgccttgcggtggcgcagcctta
gatgtgaatgtcggtagtttcttccatgcgattaatattccggtactttgtgggtacggt
atgacagaaactaacgcgactgtgacctgcaataccttaggtaatcgagtgccaggttcc
aatggacaacctttgctggaaaccgaaattaagttaggtaaggacgatgagattttagtc
cgcggcgcgactgtgatgcgcggctattacaatcgtcctgaagataccgccgctgcgttt
gaggatggttggttaaaaaccggcgatgcagggcgtttcgatgcgaacggcaatttattt
attaccgatcgtattaaagaattgatgaagacctccaacggtaaatatatcgcgccgcaa
agggttgaaggcgccgtgggctgttgtccttttatcgagcaagtggcgattattgccgat
gcgcgtaattatgtgaccgccttgattgtgcctgcgtttgagtcactggaagcgtgggcg
aaggacaaagggctgaagtatgagtcacctttagaattgctgcgccatagtcatgtggtt
gagcattttgagcaacgcttaaagcagttacagcatgagttggccggttttgaacagatt
aaaaagttcactctgttgcctgaagcattttcgatggaagcgggtttaatcaccccaacg
ctcaagctgcgccgcaagatgatttaccataaatacgcccatgaaataaatgctatgtac
aacaattaa
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