Shewanella oncorhynchi: RA178_00480
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Entry
RA178_00480 CDS
T09381
Name
(GenBank) glycerophosphodiester phosphodiesterase
KO
K01126
glycerophosphoryl diester phosphodiesterase [EC:
3.1.4.46
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
RA178_00480
Enzymes [BR:
sog01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.46 glycerophosphodiester phosphodiesterase
RA178_00480
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GFIT
Motif
Pfam:
GDPD
GPDPase_memb
GDPD_2
Motif
Other DBs
NCBI-ProteinID:
WMB73147
UniProt:
A0AA50Q5S4
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Position
complement(101986..103809)
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AA seq
607 aa
AA seq
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MLNPEHSYWHDTLKAIRRCGRKLIEFELLFTLVSAGIIVPPFGWLLRHLIAKTGNVTITN
YDLIAFAMSPYGLLFMVITLFSSFTVFFTQRAGVTILAASGLYDIPIGPVRALIFATARL
PVFIRLGSIYAACLLLLSVPFIGLGYLIFSVFLQGHDINYYLYFKPIDWYLALTSMAFLA
IIYVLVALYLWAKAAFSLTIIVSETTDALTALKRSWQLSVGNERPIMWHAAGWWLRIGAL
AYPLILLISWGTDSLLDRVTLTLSTELAILALVSALIFMLSAAWSLLGMFGEAFIILLLY
RQLGEKPAGLERLGRQTVKRTSELSIYTISGVLIGTFLIMLGLGVYALNSEPQRDDILIT
AHRAGAARAPENTLAALRLAIAEKADYAEIDVQTASDGTLMVLHDADLMRIAGDSRRVAN
LSASEIQQLDAGSWHSAAFAGESVPTLLEMLNEARNKIGLNIELKYNQADPSLAQAVVAL
LQQEKMTQQVVITSLEARAIEEVQRLDPSIHTGLIVTQSIGDPIKANTQFLAVNQSITNE
KFIARAHKGDKQVHVWTVNNPRQMLRMLALGADVLITDYPQEAVEIREQWLALSPVEQTA
LRLRYVL
NT seq
1824 nt
NT seq
+upstream
nt +downstream
nt
atgctcaatcctgaacacagttactggcatgacacgcttaaagccattcgtcgctgcggt
agaaaactcattgaatttgaactgttattcaccttagtgtcggcgggtattatcgtcccg
ccttttggctggctactgcgccatctgattgccaaaacgggcaatgtcaccatcaccaat
tacgacttaatcgccttcgccatgtctccctatggcttgctgtttatggtcattactcta
ttcagcagctttactgtgttttttacccaacgtgctggagtcacgattctcgcagcatct
gggttatacgatattcccattggcccagtgcgggcgctgattttcgcgacagcgcgctta
cccgtatttattcgccttggtagcatttatgcagcttgcttactgctgctcagcgtacct
tttatcgggttaggatatctgattttcagcgtgtttctacagggacacgatattaattac
tacttgtatttcaagcccatagactggtatctcgccttaacgagtatggccttcttagcg
ataatctatgtccttgttgccttatatctgtgggccaaagcggccttttcactgacgatt
attgtgagtgaaacgaccgatgctttgacggcactcaaacgcagctggcaattaagcgta
ggcaatgaacgcccgattatgtggcacgctgcgggttggtggttgaggataggtgctttg
gcgtatcccttaatactgctgatctcctggggaaccgatagcttactcgatagggttacg
ctgacactttcgacagaattagccatattggccctcgtctctgcactgatttttatgctc
agcgcggcatggtccttactcggaatgtttggggaagcctttatcatcttgctgttatac
cgccaactgggagaaaaacccgcagggttagaacgccttgggcgacaaacggtaaaaaga
acgtctgaactgtcgatttatacgataagcggggtgttgatcggcacttttttaatcatg
ttggggttaggggtatatgccctcaatagtgaaccacaaagggatgacatcctgattact
gcccaccgtgctggcgctgctagggcaccagaaaatacccttgcggctttgcgtttagcg
attgcagaaaaggcggattatgccgaaatcgatgtgcaaacggcatccgatggcacctta
atggtattgcacgatgctgatttaatgcgcatagcgggcgattctaggcgagttgccaac
ctcagtgcgagtgaaatacaacaacttgatgcggggagttggcacagtgccgcctttgca
ggtgaatccgtaccaacactactagagatgcttaatgaggcacgcaacaaaatcggtttg
aacattgagcttaaatataatcaagccgatcccagcttggcacaggccgttgtcgcctta
ttgcaacaagagaaaatgacacaacaagtcgtcattacatcactcgaagcaagagccatt
gaagaagtgcaacgactcgacccttccattcacactggccttatcgtaactcaatccatt
ggcgatcccattaaggcgaatacacaattcttagcggtcaatcaatcgattactaacgaa
aaatttatcgcccgtgcacacaaaggagataagcaagtgcatgtatggacagtaaataat
ccacggcaaatgctgcgcatgttggcgctgggagccgatgtgctcattaccgactatccg
caggaagccgtggaaatccgagaacagtggctcgcgttatcccctgttgaacaaacggcg
ctgcgcctacgctatgttctgtaa
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