Shewanella oncorhynchi: RA178_00670
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Entry
RA178_00670 CDS
T09381
Symbol
rlmF
Name
(GenBank) 23S rRNA (adenine(1618)-N(6))-methyltransferase RlmF
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_00670 (rlmF)
Enzymes [BR:
sog01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
RA178_00670 (rlmF)
Ribosome biogenesis [BR:
sog03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RA178_00670 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
FliH
TehB
Motif
Other DBs
NCBI-ProteinID:
WMB73183
UniProt:
A0AA50KDL1
LinkDB
All DBs
Position
144486..145586
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AA seq
366 aa
AA seq
DB search
MSKPAVKPVQLVTAKRLTSTANIGHAKTKAPKQARTEVKGKAKSVKNRPSAEIKKALHPR
NVHLNGYDFPALMSSFPKLKAFVRPTPYGALSVDFADPLAVKILNAALLKYHYGIESWDI
PDGALCPPIPGRVDYLHYLADLLAEGDDVFALDKTRVLDIGTGANGIYPILGCQVYGWQF
VASDINAGSLSNVQSIIEQNPLLQGQISLRLQPDDKAVFKGIIQAGERFELTLCNPPFHA
SMAEASEGTKRKVNNLQLNRGGLVKSSPKLNFGGQAAELWCQGGERQFLATMIRESQMVA
DQCLWFTSLVSKKENLKPCYQALAQLKVDTVKTIEMQQGNKITRVLAWSFQSAAKRTIWR
GEHLAR
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacctgccgtgaaacccgtccaattagtgactgcgaaacgcctaacgagtaca
gccaacattggtcatgcaaaaactaaagcaccaaagcaggctagaactgaggtgaaaggc
aaagccaagtcggtcaaaaacaggcctagtgctgagattaaaaaagctttacatcctcga
aatgtacacttgaacggctatgattttccggcgctgatgagttcattccctaagctaaaa
gcctttgttcgacccacgccttatggggctttatcggtcgattttgccgatccgttagca
gttaaaatccttaatgcggcgctactgaaatatcattatgggattgagtcttgggatatt
cctgatggagcgttatgtcctcctattcccggtcgagtcgattatttacattatttagca
gaccttctagccgaaggcgatgatgtatttgctttggataaaactagggtattagatatc
ggcactggcgcgaacggtatttatcccatattgggttgccaagtatacggttggcaattt
gtcgcctcggatattaatgccggttcactcagtaatgtgcagagtattattgagcaaaac
ccattgctgcaagggcagataagtttacgattacagccagatgacaaggcggtcttcaag
ggaatcattcaagccggagaacgttttgagttaaccctgtgcaatccgccatttcatgcc
tctatggctgaggcgagcgaaggtacaaagcgtaaggtgaataatctgcagctcaatcga
ggtggcttggtcaagtcttcccctaagctgaatttcggcggtcaagcggctgagctttgg
tgccaaggtggtgaacgacagtttctagcgactatgatccgtgagagccaaatggttgca
gatcaatgcttatggtttaccagtctagtgtcgaagaaggaaaacctgaaaccttgttat
caagccttagcgcagttgaaagtcgatactgtgaaaacgattgagatgcagcagggtaat
aaaattacgcgggttttagcgtggagcttccagtcagcagctaagcgcacaatctggcgc
ggtgaacacttagcccgttaa
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