KEGG   Shewanella oncorhynchi: RA178_00800
Entry
RA178_00800       CDS       T09381                                 
Symbol
gspF
Name
(GenBank) type II secretion system inner membrane protein GspF
  KO
K02455  general secretion pathway protein F
Organism
sog  Shewanella oncorhynchi
Pathway
sog03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sog00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    RA178_00800 (gspF)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sog02044]
    RA178_00800 (gspF)
Secretion system [BR:sog02044]
 Type II secretion system
  General secretion pathway protein
   RA178_00800 (gspF)
SSDB
Motif
Pfam: T2SSF DUF996 BPD_transp_1 DUF2208
Other DBs
NCBI-ProteinID: WMB73208
UniProt: A0AA50Q6M5
LinkDB
Position
177035..178258
AA seq 407 aa
MPAFEYKALDAKGKQLKGVIEADTARHARSQLRDQRMMPLEILPVTEKEAKAKSSSFSFF
KRGISVAELALITRQIATLVAAGLPIEESLKAVGQQCEKDRLASMIMAVRSRVVEGYSLA
DSLAEFPHIFDDLYRAMVASGEKSGHLEVVLNRLADYTERRQQLKSKLTQAMIYPAVLTT
VAIGVISILLAAVVPKVVGQFEHMGAELPASTRFLISASDFVQNYGVFVVIALVLLFALF
RRMLKSSAFRMKYDNFLLSMPVVGRVSKGLNTARFARTLSILSASSVPLLDGMRIASEVL
QNMRVRAAVDDATARVREGTSLGAALTNTKLFPAMMLYMIASGEKSGQLEQMLERAADNQ
DREFEGNVNIALGVFEPMLVVSMACVVLFIVMAILQPILALNNLISG
NT seq 1224 nt   +upstreamnt  +downstreamnt
atgccagcatttgaatataaggcactggatgccaagggaaagcagcttaagggcgtgatt
gaggcggataccgccagacacgcccgcagccaactgcgcgatcagcgcatgatgcccttg
gaaatactgcctgttactgaaaaagaagccaaagctaagagcagcagtttttcgtttttc
aaacgtggcatttcagttgctgaattagctttgatcacccgccaaattgcgaccttagtg
gccgcgggtttaccgattgaagaatcccttaaagccgttggtcagcagtgcgagaaagat
cgtctcgcgagcatgattatggcggtacgttctcgggtggtggaaggttatagtctggcc
gattccttggctgaatttccgcatattttcgatgatttataccgtgccatggtggcctcg
ggtgaaaagtccggtcacttagaagtggttcttaatcgtctggcggattataccgagcga
cgccaacagcttaaatctaagctgacccaagccatgatttatcccgcggttttgaccaca
gtggcgataggggtgatttcaatcctgctagcagcggtagtgcctaaagtggtcggacag
tttgagcacatgggcgccgagttacccgcttcgacccgcttcttgatttctgcctctgac
tttgtgcaaaactatggtgtgtttgtggtcatcgccttagtgctgctgtttgcactcttt
cggcgcatgttaaagtcatctgcgtttcggatgaagtacgataattttttattgagcatg
ccagttgttggccgcgtgagtaagggattaaatacggcgcgttttgcgcggacgttaagt
atcttatctgccagttcagtgcctttgctcgatggtatgcgtatcgcgagtgaagtgttg
cagaatatgcgagtgcgggccgcagttgacgatgcgaccgcacgcgtgcgggaaggaact
agcttaggtgcagcgttgactaatactaagttgtttccggctatgatgttatacatgatt
gcgtcgggcgagaagagtggtcaacttgagcagatgttagagcgggccgccgataaccaa
gacagggaattcgaaggtaacgtcaacatagcattgggtgtattcgagcctatgctggtg
gtcagtatggcgtgtgttgtgctctttattgtgatggcaattttgcagccaattttagcc
ttgaataacttgattagcggttaa

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