Shewanella oncorhynchi: RA178_01655
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Entry
RA178_01655 CDS
T09381
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_01655
Transporters [BR:
sog02000
]
Other transporters
Pores ion channels [TC:
1
]
RA178_01655
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
WMB73357
UniProt:
A0AA50Q602
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All DBs
Position
complement(347849..350038)
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AA seq
729 aa
AA seq
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MTFKTSFVALAVFAALTQSAAAQDATDNSPNNKNKDIEKITVTASRMDKSPSSIPNTVTI
IDRAQLEEQFRTTKDLSTIIGNLAPSFSPSRQKMSNTGETLRGRPPLIMIDGVPQSNPLR
SGGREGQTIDPAMIERIEIIHGANAMHGLGAQGGIINYITKKPTGDSEQVASFDVTVPDS
MKSNGLSFGASYAFSGESEFIDMIGSVSYRNNGVYYDANHNVVGVDTTQGESMDSQSKDF
FIKLGHNFDESRLELMVNHYNADNNGDWMPVAGDKPNGVPTGAVKETQPWEAANNQVTTT
SLTYTHANIGGQQLNLQLFNQDFKAVYGGGCFDSFYDPSFEGSDQVIQCGVGSKGESLYY
EQSRNASVKWGLKSSLIAKDIAGSGIDAAYGVDLFRDTTEQDLVKTGFSWVPESTYDNVA
PYLQLDYDLIENLTLSTGVRYEHAELSVDDYKTLWGAGNKQIAGGSATFDETLFNVGISY
KITPDIRVYTSYNQGFGMPDIGRILRDGKSFPGDNPSIDGSLALTPIVTDNVEVGADYQG
KYLSAKLAYYRSATDFGSRLALNSDGFYDVKREKSVIDGIEANVTAYITSNDDLGMNIAF
QQGEYDSNGDSQVDTDTDTDLDGANISPNRINLFWTHNFDNEMSTRVQANYYMDRDFKNA
AGNKYAEFDGYTTVDASFSMPLYTGTLSLGLQNLFNKDYFNYYSQTMGTNDRYFKGMGRT
AAIGYTLPF
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacattcaaaacctcgtttgttgctttagccgtattcgcagcgttaacccaatccgct
gcggcccaagatgccaccgacaacagtccaaacaacaaaaataaagacatagaaaaaatc
actgtcaccgcaagtcgaatggataaatcccccagctcgatccccaatactgtcactatc
attgaccgtgcccaattagaagaacagttccgcaccactaaagatttatcgactattatc
ggtaacttagcgcctagcttttcaccgagccgccagaagatgagtaacacaggtgaaacc
ctgcgtggtcgtccgccattgattatgatcgacggcgtgcctcaatcgaacccacttcgc
agtggtggtagagaaggacaaaccatagatcctgccatgattgagcgcatcgaaatcatt
cacggcgccaatgcaatgcacggtctcggtgcccaaggcggcatcatcaactacatcact
aaaaagccaacaggcgacagcgaacaagttgctagtttcgatgtcacagtgcctgattca
atgaaatccaatggcttaagctttggtgctagctatgcgttttctggcgagtcagaattt
atcgacatgataggttcggttagctaccgcaataatggcgtctattacgatgctaaccat
aacgtagtgggtgtcgacacgactcaaggcgagtcgatggacagtcaaagcaaagacttc
ttcatcaagcttggccataacttcgatgagtctcgccttgaattaatggttaaccattac
aatgcagacaacaatggcgattggatgcccgttgcaggtgacaagcccaatggtgtaccc
acaggtgcagttaaagaaactcagccatgggaagccgccaacaaccaagtgaccaccaca
agtttgacttacacccatgccaacattggtggccaacaacttaacctacaactctttaat
caagattttaaagcggtttatggtggcggctgtttcgacagtttctacgatccatccttc
gaaggtagcgaccaagtgatccagtgcggtgtcggcagtaaaggcgaaagcttatactac
gagcaatcgcgtaatgcttcagttaaatggggtttaaaaagctcattgattgctaaagat
attgcgggttcagggattgatgcggcctacggtgtcgaccttttccgcgataccacagag
caagacttagtaaaaactggcttttcatgggttcccgaaagtacctatgacaacgttgcg
ccatacttgcagttagattatgacttaattgaaaatttaaccttatcgactggtgttcgt
tacgaacatgccgagttaagtgtcgatgactacaaaaccctatggggtgcaggcaataag
caaattgcgggcggttcagccaccttcgatgaaaccttatttaacgtcggtatctcttat
aaaatcactcctgacattcgcgtttataccagctataaccaaggttttggcatgccggat
atcggccgaattctgcgtgatggtaaaagcttccccggcgataatcccagcatagatggc
tcactggcgctcacaccgatcgtcacagataacgttgaagtcggcgccgattaccaaggt
aaatacttaagcgctaagctagcttactatcgttccgctactgattttggctcacgtttg
gccttaaatagtgatggtttctacgacgtgaagcgcgaaaagagtgtgatcgatggtatt
gaagccaatgtcaccgcctacattaccagcaatgatgatctcggcatgaatatcgccttc
cagcagggcgaatacgattcaaatggtgatagccaagtcgataccgataccgataccgat
ctcgatggtgcaaatatttcaccaaaccgtatcaacctgttctggacccataacttcgat
aatgaaatgtcgacccgcgttcaagccaattactacatggaccgcgattttaaaaacgcg
gcgggcaataagtatgcagagtttgatggctacacgacagtcgatgcttccttctcaatg
ccgctttacactggcaccctgagcctaggtttgcaaaatctatttaataaggattatttc
aattattactcacaaaccatgggtacaaatgatcgttatttcaaagggatgggacgtact
gcagcaataggctacaccttgcctttctaa
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