Shewanella oncorhynchi: RA178_01680
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Entry
RA178_01680 CDS
T09381
Name
(GenBank) anaerobic C4-dicarboxylate transporter
KO
K07792
anaerobic C4-dicarboxylate transporter DcuB
Organism
sog
Shewanella oncorhynchi
Pathway
sog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_01680
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sog02000
]
RA178_01680
Transporters [BR:
sog02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
RA178_01680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DcuA_DcuB
Motif
Other DBs
NCBI-ProteinID:
WMB73362
UniProt:
A0AA50KE53
LinkDB
All DBs
Position
complement(352683..354017)
Genome browser
AA seq
444 aa
AA seq
DB search
MEFIVVLSCLLLGTRYGGMGLGLISGIGLFLLIFVFGLAPGQPPVQVMLTILAVIGCAAV
LQTAGGLDVMMQYAERLLRRHPQYITILAPLTTWTLTFLCGTGHVVYTMFPIISDIALKK
NIRPERPMAVASVASQMAICASPVSVAVVSMVSILASQQGVGRAYNLLEILMVSVPASLC
GVMAAALWSLRRGKDLDKDEEFQERIKDPVQRAFIYDKSETLLNQKYPKEAYWATGIFFT
AIAAVVLLGSFSELRPAFDVKGKSTLLSMNLVIQMMMLIAGAFILMTCKVKPTNISNGPV
FKAGMVAIFSVFGVAWMSDTFFISHMDVLQENLSHVVQSQPWTYALVLFLISKLVNSQAA
ALTAIAPMGLALGVDPKLLIAFLPASYGYFVLPTYPSDLACIGFDRSGTTKIGKFIINHS
FIIPGFIGVATASAVGYLLATALL
NT seq
1335 nt
NT seq
+upstream
nt +downstream
nt
atggaatttatagtagtgcttagctgcctactgctaggtacccgctacggcggcatggga
ctaggcctcatcagcggtattggcttatttttactgatttttgttttcggtttagcgccg
gggcaaccgccagtgcaagttatgctaaccatacttgcagtcattggctgtgcagccgta
ttgcaaaccgcgggtggattagatgtgatgatgcagtatgccgagcgcttactgcgccgt
catccacaatacatcacgattctagcgccgctgaccacgtggacgctgaccttcctttgc
ggtactggccatgtggtttacaccatgttcccgattatttccgatatcgcgctgaagaaa
aatattcgcccagagcgcccaatggcggtggcatctgtcgcttcacaaatggcgatttgt
gcttcgcccgtatcggtggcagtggtgtctatggtgtcgattctggcatcacaacagggt
gtaggccgcgcttacaatctgctcgaaattttaatggtgtcagtgccagcatcgctttgc
ggtgtcatggcggctgcactttggagtctgcgtcgtggtaaagatttagataaagatgaa
gaatttcaagaacgcataaaagatccagtccaaagagcctttatctatgacaagagcgaa
accctgttaaatcaaaaatatccgaaggaagcttactgggcaacggggattttcttcacc
gctatcgctgctgtggtactgttaggttcatttagtgaattgcgtcccgcctttgacgtt
aaaggtaagtcgaccttactctcgatgaacttagtgatccagatgatgatgttaattgca
ggtgcttttattctgatgacctgtaaagtcaaaccgaccaacatctctaatggccccgtt
tttaaagcgggcatggtagcaattttctcagtatttggtgtggcttggatgagtgatact
ttcttcatcagccatatggatgtactgcaggaaaacctgtcccatgtagtacaaagccag
ccttggacctatgccttagtgctgtttctcatctctaagcttgtaaatagccaagcggca
gcactcactgcaatcgcacctatgggactcgccttaggggtcgatccaaaactcttaatc
gccttcctccctgcaagctacggttatttcgtgctaccaacctatccaagtgatctagcc
tgtatcggctttgaccgttcaggtacgactaaaataggtaagttcattattaaccacagc
tttatcattccaggctttatcggtgtagcgacagcatcggctgtcggttatctactcgca
accgctttactctaa
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