Shewanella oncorhynchi: RA178_02475
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Entry
RA178_02475 CDS
T09381
Name
(GenBank) PhnD/SsuA/transferrin family substrate-binding protein
KO
K13040
two-component system, LuxR family, sensor histidine kinase TtrS [EC:
2.7.13.3
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RA178_02475
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sog01001
]
RA178_02475
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
sog02022
]
RA178_02475
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
RA178_02475
Protein kinases [BR:
sog01001
]
Histidine kinases
LuxR family [OT]
RA178_02475
Two-component system [BR:
sog02022
]
LuxR family
TtrS-TtrR (tetrathionate respiration)
RA178_02475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phosphonate-bd
HATPase_c
HisKA
SBP_bac_11
HATPase_c_5
HATPase_c_3
NMT1
Motif
Other DBs
NCBI-ProteinID:
WMB73506
UniProt:
A0AA50Q6T5
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All DBs
Position
523020..524831
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AA seq
603 aa
AA seq
DB search
MTIDSWCKAILMGCLLSIIGLNPSYANEATEVNHFRVGVLANHGVLQAKQRWQPMMDYLS
EQVPNSHFEVVPVDFNGMRSQLLEHDLQFIVTNPGQYLHLSNNFPLSWLATMKSRKHQGS
TFTIGATIIVRADSTIRTLQDLRGRNVVASDPQALGGYQAAMGLLHKMGFLPEQFFGQVR
FLGFPLEPLIYQVRDGSADAAIAPFCTLEEMIATGLVNQVDYRVIHPATPAGYDCEVSTQ
LYPNWSFAAADTVSPKLTMAITRALFDLPADHIAAITADTLGWTAPVSQLKVIELFKELQ
LQGASPPLYQTVYKWMAKNKEWGGALLLIFIISTIYHLWLEYKFRQKSEFLVSTERQLKD
KALQLERLQSAAILGEIGAGLAHELNQPIAAITQYSEGAMLQLERLGQDNPELYDVLGKI
NAQSIRAGAVVHRIRGLLKRRQAKTEPLDIVPVVKEALALLRRELDRANVQVNVRVQGEP
FELMGDSVGLSQMWVNLVKNSLDALETCGDNRVRQLWIDIYYHPNEIKVLVIDNGEGLQG
QASELMASFASTKDAGLGLGLAICKDVVTRHHGSIQIENCQQSTQALLPWQQGCVVTVVL
PKE
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgacgattgactcttggtgtaaagcgatattgatgggatgcttgttgagtatcattggg
cttaatccgtcctatgccaacgaagcgacagaagtgaaccattttagagtcggagtgctg
gcaaaccatggcgtgttacaggctaagcagcgttggcaacctatgatggattacctcagc
gagcaagtgcctaatagtcattttgaagttgtgcctgtggattttaatggcatgcgcagt
cagttacttgagcatgatttgcagtttatcgtcactaaccctgggcaatatctgcatcta
agtaacaacttcccgctgtcttggcttgcgacaatgaagagccgtaagcatcaaggtagc
acttttaccataggcgcgaccattattgttcgcgccgacagcactatccgtaccttgcag
gatttgcgcgggcgcaatgtggtcgccagtgatccgcaggccttgggggggtatcaagcg
gcaatggggttactgcataaaatgggttttttacccgaacaattttttgggcaagtgcgc
ttcctcgggttcccgttagaaccgcttatctatcaagtcagagatggcagtgccgacgcc
gcaatagcgcctttttgtaccttagaggaaatgatcgcaacgggtcttgttaatcaggtc
gattatcgggttatccatcctgcaacgcctgcaggatatgattgcgaggtgagcactcag
ttatacccaaactggtcattcgctgcggcggatacggtttctcctaagctaacgatggcg
attacccgcgccttattcgatttacccgccgatcatattgcagcaattaccgccgatact
ttgggctggactgcgcccgtgagccagttaaaagtgattgagttatttaaagaattacaa
ctacagggagcatcaccaccactttatcaaaccgtatacaaatggatggcaaaaaataaa
gaatggggtggtgcactgttgttaattttcattatttccaccatttatcacctgtggctt
gaatataagtttcgccagaaaagtgagtttttagttagcactgagcgccaattaaaggac
aaggcactgcagcttgagcgactgcaaagtgcggcgattcttggggaaataggtgcagga
cttgcccatgaactcaatcaacccatagccgccattacccaatacagcgaaggcgccatg
ttgcaactggaaaggcttgggcaagataatcctgaactctatgatgtactcggtaaaatt
aatgcgcagtcgattcgcgctggagcggttgtgcatcgtattcgcggtttactcaagcgg
cgtcaggccaagaccgaacctttagatatagtgccagtggtgaaagaagctttagctctg
ttgcggcgcgagctagaccgcgcgaatgtacaagtgaatgtgcgagtgcagggtgagccc
tttgaactgatgggcgatagcgttggtttaagccaaatgtgggtcaatttagtaaaaaat
agcttagatgcgttagaaacctgcggcgataatcgtgtgcgccaattatggatcgatatc
tattatcatccaaatgaaatcaaagtgttagttattgataatggcgaagggctacagggg
caggcgagtgagttgatggcatcttttgcctcaaccaaagatgcgggattagggcttggc
ttagccatctgtaaggatgtggtcacccgtcatcacggcagcattcaaatcgaaaactgt
cagcaatccacgcaagcgttactcccttggcaacagggctgtgtggtgacagtcgtgctt
cccaaggaataa
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