Shewanella oncorhynchi: RA178_02585
Help
Entry
RA178_02585 CDS
T09381
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
RA178_02585 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sog03400
]
RA178_02585 (priA)
Enzymes [BR:
sog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RA178_02585 (priA)
DNA repair and recombination proteins [BR:
sog03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RA178_02585 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
WHD_PriA
Zn_ribbon_PriA
AAA_30
TrwB_AAD_bind
DUF2321
Motif
Other DBs
NCBI-ProteinID:
WMB73528
UniProt:
A0AA50KE88
LinkDB
All DBs
Position
complement(546131..548326)
Genome browser
AA seq
731 aa
AA seq
DB search
MSLFVEVALPVPMRQTFSYRVPESYPSTPQIGVRVKVPFGRQQLIGLVTGITESCSLAPK
QIKSVLEFIDDKPLLPESLYKLTLWAARYYFCSQGQMLTQALPVALRKGLDAAPQKIQFW
QLTEIGQNIAPEAVKRAPAQKKLLELLKTASLTQEEVISLDISKAALKALEDKGWVARHE
KIAELNLDWRTTLEMDETPHKLNKEQAVAVATLNLQQGYHCTLLEGITGSGKTEVYLAVL
EEILKQGKQALILVPEIGLTPQTINRFKRRFKVNVAILHSGLTDNQRLEAWRQARCGQAA
IIIGTRSALFTPMAYPGIIILDEEHDSSFKQQEGVGYHARDLAVMRGHLEAIPVILGTAT
PSLESLQNALSGRYHHLQLGERAGAAKKVRQGIIDIKNMPLKAGMSVPLLNEIRLHLDAG
NQVLLFLNRRGFAPALLCHECGHLHECDRCDAFFTVHQSLGEICCHHCGNQYAIPKQCHK
CGSTMLMGQGIGTEQLAEALQQEFPKHPVVRIDRDTTRLKGSLETHLNAIHKGEYKILVG
TQMLAKGHHFPDVTLVGLLDVDGALFSADFRAPERFGQLYTQVAGRAGRASKPGTVLLQT
HQSDNPILRDLLHRGYGEFARSQLKERQQALLPPAWHMVLVRAEAHLASDADNFLNAFAA
LLPQDKEFEVIGPMPAPLDKKAGKFRRQLLFQAKNRNRLQQEFERIHPLVEQLIEAKRCR
WSLDRDPQDLL
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtcattgtttgtcgaagttgcgttaccagtgcctatgcggcaaacctttagctaccgc
gtacccgaatcctatcctagtacaccgcaaataggtgtgcgcgttaaagttcccttcggt
cgtcaacaattgatcgggttagtcactggtatcactgagtcttgcagcttagccccaaag
caaattaagtctgtgctcgagtttatcgacgataaacctttactgcctgaatcactttat
aaattaactctttgggctgcgagatactatttttgcagccaagggcagatgctaacccaa
gccttacctgtggccctgcgtaaagggctagatgccgcgccacaaaagatccaattctgg
caattaactgaaataggccaaaatattgcgcccgaagcggttaaacgcgcacccgcacag
aaaaaactactcgagttactcaaaaccgccagcttaacccaagaagaggttatcagctta
gacatcagtaaagcggcgcttaaagccctagaagataaaggctgggtggcacgccatgaa
aaaattgccgagcttaacctcgactggcgcaccacactcgaaatggacgaaacgccacat
aaactcaataaagaacaagccgtcgctgttgccactttaaatctgcaacaaggatatcac
tgtactttattagaaggcattaccggttcgggtaaaacggaagtctatcttgctgtactc
gaagaaatcctcaagcaaggcaaacaagcgttaattttagtgcctgaaatcggcttaaca
ccccagacaatcaatcgctttaagcgccgcttcaaagtcaatgttgccattttacattca
gggttaaccgacaatcagagactcgaagcatggcgccaagcccgctgtggtcaggctgca
atcattatcggcacccgctcagccttgttcacacctatggcgtatcccggcatcatcata
ctcgatgaagaacacgacagtagcttcaaacaacaggaaggcgttggttatcatgcccgc
gacttggcagtcatgcgtggccatttagaagcgattccggtgattttgggcacagcgacg
ccctcactcgaaagtctacaaaatgccttaagcggccgttaccatcatttacaattgggt
gagcgcgcaggtgcggctaaaaaagtgcgccaaggcattatcgacattaaaaatatgccg
ctgaaagccggtatgtcagtgccgctactgaacgaaatccgcctgcatttagacgctggc
aaccaagtcttgttgtttctcaatcgccgcggcttcgcaccagccctgctttgccacgag
tgtgggcacttacacgaatgcgaccgctgcgacgcgtttttcactgtacatcaatccctt
ggcgaaatttgctgtcaccattgtggcaatcaatacgccatccccaagcagtgtcacaaa
tgtggcagcactatgttgatgggtcaaggcataggcacagaacagctcgccgaagcgctg
caacaagagtttcctaaacatccagtagtgcgcatcgaccgtgatacgacccgccttaaa
ggttcattagaaacccacttaaatgcgattcataagggggaatataaaatcctcgtcggc
acgcaaatgctagctaagggccatcacttccctgatgtgacgcttgttgggttactcgat
gtcgatggcgccttatttagcgccgacttccgcgcgcccgaacgttttggacaactctat
acccaagttgcaggtcgtgcagggcgcgccagtaaacccggcacggtattattgcaaact
caccagagcgacaatcctattttgcgggatttgctgcaccgcggttatggcgagtttgct
cgcagccagctcaaagaacgtcaacaagcactgctgccgccagcatggcacatggtgttg
gtgcgcgccgaagcgcatttagccagtgatgccgataactttctcaacgcctttgccgcg
cttttgccgcaagataaagaatttgaggtgattggtcctatgccagcgcccttagataaa
aaagccggcaagttccgccgccaactcttattccaagctaaaaaccgcaatcgcttgcaa
caagagtttgaacgtattcatccgcttgtagaacaacttatcgaagctaaacgctgccga
tggagcttagacagagatccgcaggatctcctctga
DBGET
integrated database retrieval system
