Shewanella oncorhynchi: RA178_03100
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Entry
RA178_03100 CDS
T09381
Name
(GenBank) M9 family metallopeptidase
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sog01002
]
RA178_03100
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
sog02042
]
RA178_03100
Enzymes [BR:
sog01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
RA178_03100
Peptidases and inhibitors [BR:
sog01002
]
Metallo peptidases
Family M9
RA178_03100
Bacterial toxins [BR:
sog02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
RA178_03100
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M9
Peptidase_M9_N
PPC
Motif
Other DBs
NCBI-ProteinID:
WMB73627
UniProt:
A0AA50Q6A2
LinkDB
All DBs
Position
complement(681052..684159)
Genome browser
AA seq
1035 aa
AA seq
DB search
MKNTLLFAAISLAIATPVLAHNTHASPPLGNNSSPAQPVPPPPSAPISLIESHRPLLRET
PLMASPNDPTMTEQPKIHSRQKRQIEVSEQPPLKLQNRSTAMQVSDCSDFVGKSGQALVN
ELSQSTPECVGKLYSLKGSAATALFSEANVISVANAIAAKAKDYTGVDVQHLESHIYFVR
AALYVQFYSPNDVPAYSSAAKASLKSALNALFANAAIWTVSDANAGVLKEALILIDSAEL
GADFNHVTIKVLTDYDANWQASFAMNAAANSVFTTLFRAQWNDDMQALFARDQGILDALN
NFQLEHRNLLGTNAEYLLVNSVKELSRLYYIDAMRPRVTQLVKNILSSTSKTEPSKVLWY
AAAEMADYYDRSHCNDYNICGFKAQLEADALPFNWKCSDSLKIRAQDLYQDQAKWACDVL
TSQESYFHSKLETGMQPVGQDNNDDLELVIFGSSSEYKSLANSIFGISTDNGGMYLEGSP
AGLKNQARFIAYEAEWRTPDFHVWNLQHEYVHYLDGRYNLFGDFSRGTSANTIWWIEGLA
EYISYRDANPAAIAMGETGEFMLSTIFKNNYESGQDRIYRWGYLAVRFMFEHHRDDVRQI
LAYLRNDQYAEYQAFMDNIGTRYDNEWQGWLASGLSTADDGIVDKGPSDVDAEPSGREGN
WTGPAGTISKDYSPCQVTNEAYRYTESASLKIDVPMECIDSKLGRASFSFTNTDRTAQEL
WIKIGGGWGDADIYFDSRGWASPEQNQGAGIGNGNYQVIKVQLNPNEYWHYITLSGDFGG
VDMQVSTTELFADIDPDLGDGGVDPEPPANCGAATLDYGKLTLGKNECISGGRNSFYFWV
EEDDTQFTITTKGGSGDANIYFNASQWADADNADAKSSQAGNQESLSFSANRGWRYITID
TATEFSGVTLTLSTGTSNTPDPVLIANACATQSPLSYGELSAGKAICTADGRNDYYLWVP
EGTNQLSINSAHGSGDVSLFSGTTWANAQHFDAASVTPANTRESITVNAPNVGWYYITVQ
SEPQSAGVALQVDLR
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaacacactactcttcgcagcaattagcttagcgattgcaactcccgttcttgcc
cataacacccatgcaagccccccattaggcaacaacagttcaccagctcaacccgtcccg
ccaccgccctctgcaccgattagcttaattgaatcacatagaccactgctacgggagacg
ccattgatggcatcccctaatgatcctacgatgacagagcagcctaagattcattcacgc
cagaaacgtcagatagaggtctcggagcaacccccacttaagttgcagaatcgtagcacc
gcgatgcaagtcagcgactgcagtgactttgttgggaaatcaggtcaggcactagtcaat
gaactgagccaatcgacacccgaatgcgtcggtaagctctatagcctcaaaggcagtgct
gcgaccgcgctatttagcgaggccaatgtgatcagtgtggctaatgccattgccgctaaa
gccaaggactacactggggtcgatgttcagcatcttgagtcccatatttactttgtccgc
gccgccctctatgtgcagttttacagcccaaatgatgtgcccgcttacagcagcgccgct
aaggccagcttaaaatcagccctcaacgctttatttgcgaacgctgcgatttggacagtc
tccgatgctaatgctggcgtgttgaaagaagccttaatcctgattgactcagccgagctc
ggagccgatttcaatcatgtcactatcaaagtgcttacggactatgatgctaattggcaa
gccagcttcgccatgaacgccgcagccaactcagtgtttaccaccttattccgcgctcaa
tggaatgatgacatgcaggcgctgttcgcgcgtgatcaagggattttagatgcgctgaat
aacttccaactcgaacatcgcaacttgttaggcaccaatgcagagtaccttttggtcaac
tcagttaaagagttatctaggctgtattacattgatgccatgcgcccgcgagtgacccag
ctggtcaaaaacatcctcagcagcaccagcaaaaccgaaccgagcaaagtgctttggtac
gcggcggcagaaatggcagactattacgatcgcagccattgtaacgattacaatatctgt
ggttttaaggcgcagttagaagccgatgctttaccttttaattggaaatgctccgacagt
ctcaagatccgcgcccaagatctctatcaagatcaagccaagtgggcctgtgatgtgcta
accagccaagaaagttatttccacagtaaactcgaaacgggcatgcaacccgtggggcag
gataacaacgatgacttagagctagtgatcttcggcagttcgtctgagtataaatcctta
gccaacagtatatttggtatcagtaccgacaatggcggcatgtatttagaaggctcaccc
gccggactcaaaaatcaggcacgtttcatcgcctatgaagccgaatggcgcacgccggat
ttccacgtctggaacctgcaacacgaatacgtacactacctcgatggacgctataacctg
tttggtgactttagtcgtggcacttcggccaataccatttggtggattgaaggcctcgcg
gaatacatctcttaccgtgacgcaaaccctgcggcaattgccatgggcgaaaccggtgag
tttatgttatcgaccatcttcaaaaacaactatgaatctggccaagaccgcatctatcgc
tggggctatctggcggtgcgtttcatgtttgaacaccacagggacgatgtgagacagatt
ctggcctacctacgcaacgatcaatatgcagaatatcaagcctttatggataatatcggc
acacgttacgataacgaatggcagggttggctcgccagtggtttaagcacggctgacgat
ggcatagtcgataagggcccgagtgatgtcgacgctgagcctagtggccgcgaaggcaac
tggacaggaccagcaggcactatcagtaaggattactcgccttgccaagtgactaacgaa
gcctaccgttacacagaatcggccagcctgaaaattgatgtgccgatggaatgtatcgat
tcaaaactcggccgcgccagtttcagcttcaccaataccgatcgcacagcccaagagctt
tggatcaagattggcggtggttggggggatgccgacatttatttcgattctagaggctgg
gcaagccctgagcaaaaccaaggcgctggtatcggtaatggtaattatcaagtgattaag
gtgcagttaaaccctaacgagtattggcactacattaccttatcgggggactttggcggc
gtcgatatgcaagtcagcaccactgagctatttgctgatatcgaccccgatctgggggat
ggcggcgtggatcctgagccaccagccaattgcggcgcagcgaccttagattacggtaag
ctcaccctaggcaaaaatgagtgcatcagtggcgggcgtaacagcttctacttctgggtt
gaggaagatgatacccagttcactatcaccactaagggcggctctggggatgccaatatt
tacttcaatgccagtcagtgggccgacgcagataatgccgatgcaaagagctctcaagca
ggaaatcaagaatcgcttagcttcagcgccaatcgtggctggcgttatatcacgattgat
actgccactgagtttagcggcgtaacactgaccttaagcacaggcacgagtaacacaccc
gatccggtgctcattgccaacgcctgcgcgacgcaatcacccttaagttatggtgagctc
agtgctggcaaagccatttgcaccgccgatgggcgcaacgattattacctttgggtacca
gagggaactaatcagctaagcatcaactccgcccacggcagtggtgatgttagcctgttt
tcggggacgacttgggcgaatgctcaacacttcgatgcagcctctgtgacacccgccaac
acgcgggaaagtatcacagtcaatgcaccaaacgtgggttggtattacatcacagtgcag
agtgagccccagagtgcgggagtcgcactgcaggttgatttacgctag
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