Shewanella oncorhynchi: RA178_03175
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Entry
RA178_03175 CDS
T09381
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RA178_03175 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sog03019
]
RA178_03175 (groL)
03110 Chaperones and folding catalysts [BR:
sog03110
]
RA178_03175 (groL)
03029 Mitochondrial biogenesis [BR:
sog03029
]
RA178_03175 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sog04147
]
RA178_03175 (groL)
Enzymes [BR:
sog01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RA178_03175 (groL)
Messenger RNA biogenesis [BR:
sog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RA178_03175 (groL)
Chaperones and folding catalysts [BR:
sog03110
]
Heat shock proteins
HSP60 / Chaperonin
RA178_03175 (groL)
Mitochondrial biogenesis [BR:
sog03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RA178_03175 (groL)
Exosome [BR:
sog04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RA178_03175 (groL)
Exosomal proteins of other body fluids (saliva and urine)
RA178_03175 (groL)
Exosomal proteins of breast cancer cells
RA178_03175 (groL)
Exosomal proteins of colorectal cancer cells
RA178_03175 (groL)
Exosomal proteins of bladder cancer cells
RA178_03175 (groL)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
WMB73641
UniProt:
A0AA50Q6Y2
LinkDB
All DBs
Position
703272..704909
Genome browser
AA seq
545 aa
AA seq
DB search
MAAKEVVFGNDARVRMLAGVNILANAVKVTLGPKGRNVVLDKSFGSPLITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVVEGLKAVAAGMNPMDLKRGI
DKAVIAAVAELKALSQPCADSKAIAQVATISANSDESIGEIIATAMEKVGKEGVITVEEG
QALENELDVVEGMQFDRGYLSPYFINKPETGSVELDHPFVLLVDKKISNIRELLPILEGL
AKTGKPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDVAILTGGTV
IAEEIGLELEKATLEDLGTAKRVVITKDNTTIIDGNGEQTQIAARVSQIKQQVEESTSDY
DKEKLQERMAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVPGGGVALV
RVASKIADVEVLNEDQKHGVVIALRAMEAPLRQIATNAGEEASVVANTVKNGSGNFGYNA
GNDTYGDMLEMGILDPTKVTRCALQFAASIAGLMITTEAMVAEIPQNASQDMGGMGGMGG
MGGMM
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagaagttgtatttggtaatgacgctcgcgtaagaatgctggctggcgta
aacattctcgcaaacgcagttaaagtgaccttaggccctaaaggccgtaacgtggtatta
gacaagagcttcggctcaccactgatcactaaagacggtgtttctgttgccaaagaaatc
gagttagaagacaaattcgaaaacatgggcgcgcaaatggtgaaagaagttgcttctaaa
gccaacgacgccgccggtgatggtactactactgcaactgtactggctcaagccattgta
gttgaaggcttaaaagccgttgcagccggtatgaacccaatggatctgaagcgcggtatc
gacaaagccgttatcgctgcagttgctgaattaaaagccttatcacaaccttgtgcagat
tcaaaagcgattgcacaagttgcgactatctctgcaaactctgacgaatctatcggcgaa
atcatcgcaacagcgatggaaaaagtcggtaaagaaggcgtgatcacagttgaagaaggc
caagcgttagaaaacgaattggacgtagtagaaggtatgcagtttgaccgtggctaccta
tctccatacttcatcaacaagccagaaacgggcagcgttgaattagatcacccattcgta
ctgttagtagacaagaaaatctctaacattcgcgaactgttacctatccttgaaggtctg
gcaaaaaccggtaagccattgcttatcgttgctgaagacgttgaaggcgaagcattagca
actttagttgtgaacaacatgcgcggtatcgtgaaagtggctgccgttaaagcacctggc
tttggcgatcgtcgtaaggcaatgctgcaagacgtagcaatcctgactggcggtactgtt
attgctgaagaaatcgggctagagcttgaaaaagcaacgctggaagatttaggtacagct
aagcgtgttgtgatcactaaagacaacaccaccatcatcgatggtaacggcgagcaaaca
caaattgctgctcgtgtaagccaaatcaaacaacaagttgaagaatcaacgtcagactac
gacaaagaaaaactgcaagagcgtatggctaaactagctggcggcgtagcagtgattaaa
gttggcgcagcgactgaagttgaaatgaaagagaaaaaagcccgcgttgaagatgctctg
catgcaactcgcgctgcggtagaagaaggcgtggttcctggcggcggtgttgctctggtt
cgcgtagcttctaagatcgctgacgttgaagtattaaacgaagaccaaaaacacggtgtg
gttatcgcactgcgtgcaatggaagcaccactgcgtcaaatcgccactaacgcgggtgaa
gaagcgtcagttgttgctaacacagtgaagaacggcagcggtaacttcggttacaacgcc
ggtaatgacacttacggtgacatgttagaaatgggtatccttgacccaactaaagtgacc
cgttgtgcattgcaattcgctgcgtcaatcgcaggtctgatgatcactacagaagctatg
gttgctgagatcccacaaaatgctagccaagatatgggcggtatgggtgggatgggcgga
atgggcggcatgatgtaa
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