Shewanella oncorhynchi: RA178_03310
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Entry
RA178_03310 CDS
T09381
Name
(GenBank) PA4780 family RIO1-like protein kinase
KO
K07178
RIO kinase 1 [EC:
2.7.11.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RA178_03310
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
sog01001
]
RA178_03310
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_03310
Enzymes [BR:
sog01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
RA178_03310
Protein kinases [BR:
sog01001
]
Serine/threonine kinases: Other
RIO family [OT]
RA178_03310
Ribosome biogenesis [BR:
sog03009
]
Eukaryotic type
Pre-40S particles
Kinases
RA178_03310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIO1
APH
YrbL-PhoP_reg
Kdo
TCAD9
ABC1
Pkinase
Nnf1
Motif
Other DBs
NCBI-ProteinID:
WMB73666
UniProt:
A0AA50KG24
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All DBs
Position
729958..730818
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AA seq
286 aa
AA seq
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MKTPKRIQPLVDEGLVDEVISQLMSGKEATVYVVRSGDDIRCAKVYKEADKRSFKQAVLY
QEGRKVRNSRRARAMEKGSKFGRDQQEEAWQNAEVEALYRLANAGVRVPTPYGCFDGVLL
MELVTDAEGNVAPRLNDVSMSAEKALKDHALVMTYVKRMLCAGLVHGDLSEFNVLVDSEG
PVIIDLPQAVDAAANNHAKWMLARDVNNMTQYYGLYAPELLKTQYAKEIWALFEAGELKP
ETPLTGEFTEVLVEADVSAVLEEIQAAFEEAQERKQRIQEANEEDY
NT seq
861 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactccgaaacgaatccaacccctggttgatgaaggactggtcgatgaggtcatt
agccagttaatgagcggtaaagaagcgactgtgtacgttgtacgcagtggtgatgatatc
cgctgtgccaaagtctataaagaagcggacaagcgcagttttaagcaagctgtgttatat
caagaaggccgaaaagtccgtaacagtcgtcgtgcgcgcgcgatggaaaaagggtctaaa
tttggccgcgatcagcaggaagaagcttggcaaaatgctgaagttgaagcactttaccgt
ttagcgaatgcaggtgtgcgggtgccaacaccttacggctgttttgatggcgtgttgctg
atggagttagtgacggatgccgagggcaatgtcgcgccgagattaaacgatgtcagtatg
tcggcagaaaaagccttgaaggatcatgcgttggtgatgacctatgttaaacgtatgctc
tgtgcggggttagtgcacggtgacttgtctgagtttaatgtgttagttgatagtgaaggg
ccagtgattatcgacttacctcaggccgtcgatgccgcggcgaataaccatgctaaatgg
atgttagcgcgtgatgtgaataacatgactcaatactatggtttgtatgctcctgagctg
ctaaaaacacaatacgccaaagaaatttgggccttgtttgaagccggtgaattgaagcct
gaaacgccattaacgggtgagtttaccgaagtgctggttgaagccgatgttagtgcggtc
ttggaagaaatccaagcagcctttgaagaggcacaagagcgtaagcagcggatccaagag
gcaaacgaagaagactattaa
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