Shewanella oncorhynchi: RA178_03320
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Entry
RA178_03320 CDS
T09381
Name
(GenBank) OmpA family protein
Organism
sog
Shewanella oncorhynchi
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
OmpA
Gly-zipper_Omp
Gly-zipper_YMGG
Rick_17kDa_Anti
Gly-zipper_OmpA
DUF3482
DUF6861
Motif
Other DBs
NCBI-ProteinID:
WMB75188
UniProt:
A0AA50Q8I5
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Position
732441..733130
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AA seq
229 aa
AA seq
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MKCFQAVQSKPSLLAIVVLTTALVASGCTTINPYSNEEQTAKATSGALIGAVAGAAIGVV
SSSKSDRGKGALIGAASGAAVGGGIGYYMDVQETKLRQQLASTGVSVTRNGDNIILNMPN
EVTFGVDQTELSDGAKRVLNSVAVVAKEYSKTQLNVLGYTDSSGSDSYNLRLSQVRASEV
GNYLMSKGVASARVKSKGMGEASPIASNANANGRAQNRRVQIVLIPTGK
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgttttcaggcagtgcaatctaaaccatccctgttagccatagtggtattgacg
accgcgctagttgcatcgggttgtacaacaatcaatccctattcaaacgaagaacaaacc
gctaaagcgaccagtggcgcattgattggtgccgtcgcgggtgccgcaattggagtggta
tcttcgagcaagagcgaccgcggtaaaggtgccttaattggtgctgcatcgggcgctgca
gtcggtggtggtattggttattacatggatgtgcaagagaccaaattacgccaacaatta
gcctcaacgggcgtgagtgtgacccgtaacggcgataacatcattttgaatatgcctaat
gaagtgaccttcggcgtagatcaaaccgagttaagtgacggtgctaaacgcgtgctgaat
tcagtggcggttgtggccaaggaatacagcaaaacgcagcttaacgtattaggttatacg
gacagcagtggttcagactcttacaatttacgtctgtcacaggtccgtgctagcgaagtg
ggtaattacttgatgagtaaaggcgttgcctctgcccgtgtaaaatcaaaaggtatgggt
gaagcgagtcctattgcatcaaatgccaatgcaaatggccgagcacaaaaccgccgcgtt
cagatcgtactaataccaacgggtaaatag
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