Shewanella oncorhynchi: RA178_03340
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Entry
RA178_03340 CDS
T09381
Symbol
rapZ
Name
(GenBank) RNase adapter RapZ
KO
K06958
RNase adapter protein RapZ
Organism
sog
Shewanella oncorhynchi
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sog03019
]
RA178_03340 (rapZ)
Messenger RNA biogenesis [BR:
sog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
RA178_03340 (rapZ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_16
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
WMB73671
UniProt:
A0AA50Q6Z2
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Position
complement(736189..737043)
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AA seq
284 aa
AA seq
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MKLVIVSGRSGSGKSVALRVLEDLGYYCVDNLPLPLIGSLLEQLKGSNDLVAISVDVRNM
PEQDKVLVKQLASLPPDTELTSFFLNSSDKILLKRYSETRRLHPLSKSRVSLQEAIKLEG
KLLEPMSKLVDHYIDTSNLNIYDLSDQVRQILLGSVDKELVINFESFGFKHGMPTEADFM
FDVRFLPNPHWELALRPLTGLDEPVAEFLNRQPLVNKFIWQIENLLETWLPHLERNNRSY
LTVAIGCTGGQHRSVYVAEQLAKRFSNGKHKVYARHRELNNAKA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaaactggtcatagtgtcgggccgctcaggctcaggcaaatctgtcgcccttagggta
ctcgaagatctcggctattattgtgtcgataaccttcccttgccattgattggcagtttg
cttgagcaactcaaaggcagtaacgatctcgtcgccatcagtgtcgacgtgcgtaacatg
cctgagcaggataaggtcttagtgaaacaactcgctagcctacctccagatactgagtta
acgagcttcttccttaactccagcgataaaattctgctcaagcgttacagcgaaacccgc
cgtttgcatcctttgtcgaagagccgagtctctttgcaagaagcgataaagctggagggg
aaactgcttgagcctatgtcaaaactggtcgatcactacatagatacgtcgaatttgaat
atctatgatttaagcgaccaagtccgacaaattctccttggtagtgtcgataaagaactc
gtgatcaacttcgagtcctttggctttaagcacggaatgcccaccgaagccgactttatg
ttcgatgtgcgcttcctgcccaatccccactgggagctggcgctgcggccattgactggc
ttagatgaacccgtagctgagttcttaaatcgtcaaccactggttaataagttcatctgg
caaatcgaaaatttactggagacttggctgccgcacctcgagcgtaacaatcgcagttat
ttaactgtggccattggctgcacaggtggacagcacagatcggtttacgtcgcagagcaa
ttggccaaacgctttagtaacggtaaacataaagtgtatgcccgtcatcgagagctcaat
aatgccaaagcttga
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