Shewanella oncorhynchi: RA178_03515
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Entry
RA178_03515 CDS
T09381
Symbol
alr
Name
(GenBank) alanine racemase
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
sog
Shewanella oncorhynchi
Pathway
sog00470
D-Amino acid metabolism
sog01100
Metabolic pathways
sog01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RA178_03515 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
RA178_03515 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sog01011
]
RA178_03515 (alr)
Enzymes [BR:
sog01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
RA178_03515 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
sog01011
]
Precursor biosynthesis
Racemase
RA178_03515 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
WMB73706
UniProt:
A0AA50KFI2
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All DBs
Position
767282..768358
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AA seq
358 aa
AA seq
DB search
MNPFPRAEISSSALQTNLAALRQQAPASRVMAVVKANGYGHGLLNVANCLVNADGFGLAR
LDEALELRAGGVTARLLLLEGFFRATDLPLLVGHDIDTVVHHSSQLEMLEQTVLSKPVTV
WLKVDSGMHRLGFTPEQFSTVYARLMACPNVAKPIHLMTHFACADEPENTYTSVQMAAFN
TLTAGLPGFRTLANSAGALYWPQSQGDWIRPGIALYGVSPVTGDCGANHGLVPAMELVSQ
LIAVRNHKANQPVGYGCFWTAKQDTRLGVVAIGYGDGYPRNAPEGTPVWVNGRRVPIVGR
VSMDMLTVDLGQGAQDKVGDSALLWGKALPVEEVAEHIGTIAYELVTKLTPRVAVCLA
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaacccttttccccgtgcagaaattagcagtagtgcactgcaaaccaatctcgctgcg
ttgcgtcaacaggcaccagcgagtcgtgtgatggccgtcgttaaagcgaacggttatggt
catggattattgaatgtcgctaattgtttagtcaatgccgatggctttggcctagcacga
ttggatgaggccttagaattacgagcgggcggcgtgacagcgcgtttgttattactagaa
ggttttttccgtgccaccgatcttccgttactcgtcgggcatgatatcgacactgtagtg
caccacagctctcagcttgaaatgttagagcaaactgtgttgtcaaaacctgtcactgtc
tggcttaaagtggattcaggcatgcatcgtttaggttttacgcccgaacaattttcaacg
gtttacgcaaggttaatggcctgtcccaatgtggcaaaaccgatccatttgatgacacat
tttgcctgtgcggacgagcctgaaaacacctatacctcagtacagatggcggcttttaat
acgttaacggcaggcttgcccggatttagaaccttagcaaactctgctggtgctttgtat
tggcctcagagccaaggcgactggatccgtcctggtattgcactctatggcgtatctcct
gttactggtgattgcggtgcgaatcacgggctagttcctgcgatggaattagtatcacag
ttgattgcggtacggaatcataaagccaatcagcccgtcggctatggttgtttctggacc
gcgaagcaagatacccgtttaggtgtcgtggcgattggttatggtgatggttatcctcgc
aatgcaccggaaggcacacccgtgtgggtcaatggtcgccgcgtacccatagtcggccgt
gtttctatggacatgttgactgttgacttaggtcaaggtgcgcaagataaagttggggat
agtgcattgctgtggggtaaggcattacccgtggaggaagtcgctgaacatatcggcact
atcgcttatgaattagttactaagcttacgccaagggttgctgtttgcttagcttaa
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