Shewanella oncorhynchi: RA178_03670
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Entry
RA178_03670 CDS
T09381
Symbol
orn
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
sog
Shewanella oncorhynchi
Pathway
sog03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
sog00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
RA178_03670 (orn)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sog03019
]
RA178_03670 (orn)
03009 Ribosome biogenesis [BR:
sog03009
]
RA178_03670 (orn)
Messenger RNA biogenesis [BR:
sog03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
RA178_03670 (orn)
Ribosome biogenesis [BR:
sog03009
]
Eukaryotic type
Pre-60S particles
RNases
RA178_03670 (orn)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
WMB73735
UniProt:
A0AA50Q7E9
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All DBs
Position
789489..790103
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AA seq
204 aa
AA seq
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MEQFFLFGDLETGGLNGRLDNGMLGMEYYPIFELAFIVTDSELNQVGEALHIVVHQDDEH
IARSHEWAIDVHTKSGLLAAVRASSVSLAQAEQMVLEHLKALGIPKHDRKAKTGVVFAGN
SIMFDRSFIMCQMPELHEYMHYRQLDISALGLAARAWAPEVERNAIKAKQYQHEALADIR
ESIAKLKYYRDELFGCEISSLSIG
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggagcaattctttttgtttggtgatttagaaacgggtgggctgaacggccgcttagac
aatgggatgctgggtatggagtattaccctatctttgagctggcctttatcgtgactgat
agtgagctaaaccaagtgggtgaagcgctgcacattgttgtgcatcaagacgatgaacac
attgcaaggtcacatgagtgggcgatagatgtgcataccaagagtgggttgttagctgct
gttcgtgcctcatcagtatcgttagcacaggctgagcagatggtactcgaacacctgaaa
gcactgggaatacctaagcatgaccgtaaagctaagactggtgtggtgtttgcgggtaac
tcaatcatgtttgatcgttcgtttatcatgtgccaaatgcctgagcttcatgagtacatg
cattacaggcagctagacatatcagcactagggctcgcagctagagcttgggcgcctgag
gttgagcgtaatgcgattaaggctaagcagtatcagcatgaagccttagccgatattcgg
gagtcgatagcgaaactcaagtactatcgcgacgagttgtttggttgtgaaatatcatct
ttgtcaataggttag
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